Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 RPS4XP1-201ENST00000482189 787 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 UBA52P7-201ENST00000486088 380 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 PGAM1P13-201ENST00000507497 754 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 ATP5LP3-201ENST00000514223 304 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 RNU6-1038P-201ENST00000516516 104 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 AC009902.1-201ENST00000519351 183 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 PTP4A1P6-201ENST00000531034 478 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 AL049779.2-201ENST00000553847 315 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 AC127381.1-201ENST00000555979 939 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 AL669831.4-202ENST00000590817 238 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 MIR6768-201ENST00000610734 72 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 AC245517.5-201ENST00000611529 162 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 AC244100.1-202ENST00000621554 382 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 AL450345.1-202ENST00000605741 3881 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 AC112198.2-201ENST00000426589 6996 ntBASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.43□□□□□ -1.54
AP4E1Q9UPM8 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 U3.2-201ENST00000362981 210 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 U3.3-201ENST00000362986 216 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 RNA5SP90-201ENST00000364801 99 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 RNU1-74P-201ENST00000384108 171 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 MIR19A-201ENST00000384878 82 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 SSXP10-201ENST00000402595 565 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 AC079355.1-201ENST00000421770 223 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 USP9YP16-201ENST00000430287 407 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 AC020550.1-201ENST00000447385 163 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 PPIAP20-201ENST00000449839 135 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 USP9YP23-201ENST00000455085 407 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 BTF3P15-201ENST00000455606 336 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 Z92846.1-201ENST00000456203 268 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 MTATP8P1-201ENST00000467115 207 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 AL136126.1-201ENST00000473603 402 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 OR2AO1P-201ENST00000476497 403 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 Y_RNA.654-201ENST00000497848 106 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 RPS4XP20-201ENST00000505751 772 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 AC116562.3-201ENST00000506136 177 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 RPL39P5-202ENST00000512505 151 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 AC093853.1-201ENST00000515689 483 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 RN7SKP24-201ENST00000515888 284 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 RNU6-566P-201ENST00000516790 107 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 AC012400.1-201ENST00000518452 381 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 AC011979.2-201ENST00000527568 352 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 AC068587.5-201ENST00000528506 175 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 LSM3P2-201ENST00000551246 273 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 SETP2-201ENST00000553886 926 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 AL358913.1-201ENST00000554342 121 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 MIR4790-201ENST00000577799 79 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 AC022884.2-201ENST00000578535 580 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 MIR5583-1-201ENST00000580941 59 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 uc_338.34-201ENST00000617467 174 ntBASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
AP4E1Q9UPM8 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 RNU6-1115P-201ENST00000362490 106 ntBASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 RNU6-511P-201ENST00000363496 107 ntBASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 Y_RNA.158-201ENST00000363651 101 ntBASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 RNU6-1293P-201ENST00000384077 107 ntBASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 AL391361.1-201ENST00000405580 489 ntBASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 Y_RNA.618-201ENST00000410949 107 ntBASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 RNU6-954P-201ENST00000411355 107 ntBASIC5.41□□□□□ -1.54
AP4E1Q9UPM8 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms