Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 Z92545.1-201ENST00000411782 234 ntBASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 RPS7P9-201ENST00000414704 586 ntBASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 AC005326.1-201ENST00000429197 123 ntBASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 AL158071.1-201ENST00000430315 461 ntBASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 AC011242.1-201ENST00000433596 1158 ntBASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 SETP5-201ENST00000437270 562 ntBASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 AC093155.1-201ENST00000440164 826 ntBASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 RPL7P52-201ENST00000449200 742 ntBASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 ACTG1P13-201ENST00000486987 1043 ntBASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 AL024509.2-201ENST00000493462 493 ntBASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 BOLA3P3-201ENST00000505182 232 ntBASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 AC069306.1-201ENST00000507006 843 ntBASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 MTCO2P32-201ENST00000514865 403 ntBASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 AC010198.2-201ENST00000550612 259 ntBASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 MTCYBP27-201ENST00000555160 670 ntBASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 MIR3186-201ENST00000577404 85 ntBASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 AC092628.2-201ENST00000622492 339 ntBASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 AC080188.3-201ENST00000624842 748 ntBASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 ZNF542P-204ENST00000482727 1305 ntBASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
NPIPA1Q9UND3 AC007256.1-201ENST00000392253 2765 ntBASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 NUP58P1-201ENST00000502546 1738 ntBASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 U3.19-201ENST00000390893 196 ntBASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 Y_RNA.578-201ENST00000390903 88 ntBASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 SEPT7P5-201ENST00000434048 306 ntBASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 PTGES3P1-201ENST00000439531 483 ntBASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 AL591503.2-201ENST00000442314 1005 ntBASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 MTCYBP42-201ENST00000444653 1130 ntBASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 SLC31A1P1-201ENST00000451221 567 ntBASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 BTF3P5-201ENST00000457252 467 ntBASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 snoU13.4-201ENST00000458916 104 ntBASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 RN7SL594P-201ENST00000470590 287 ntBASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 RN7SL807P-201ENST00000470923 297 ntBASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 AC084357.1-201ENST00000473404 255 ntBASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 AC017015.1-201ENST00000477387 286 ntBASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 DUXAP6-201ENST00000553858 601 ntBASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 AF131215.7-201ENST00000602443 707 ntBASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 RNU6-1192P-201ENST00000612197 107 ntBASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 RNVU1-4-201ENST00000612985 164 ntBASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 RNU6-489P-201ENST00000618289 107 ntBASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 SNORA50A-202ENST00000629536 136 ntBASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 AC068647.1-201ENST00000489539 2265 ntBASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
NPIPA1Q9UND3 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
NPIPA1Q9UND3 Z99496.1-201ENST00000469424 1477 ntBASIC3.16□□□□□ -1.9
NPIPA1Q9UND3 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms