Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 RNA5SP497-201ENST00000516081 97 ntBASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 MTCO2P4-201ENST00000517968 247 ntBASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 MIR3149-201ENST00000584629 83 ntBASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 AC005255.1-201ENST00000593748 216 ntBASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 AC106028.5-201ENST00000610332 395 ntBASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.39□□□□□ -1.39
COL17A1Q9UMD9 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 RNU6-543P-201ENST00000362576 108 ntBASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 Y_RNA.67-201ENST00000362870 100 ntBASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 RNA5SP151-201ENST00000365632 117 ntBASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 Y_RNA.573-201ENST00000384763 105 ntBASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 IL6-203ENST00000401651 539 ntTSL 2 BASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 RNA5SP498-201ENST00000411342 120 ntBASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 AC073464.1-201ENST00000429823 534 ntBASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 SEPT7P5-201ENST00000434048 306 ntBASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 DNAJC8P1-201ENST00000554535 372 ntBASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 AL137843.1-201ENST00000605078 385 ntBASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 AC055839.1-201ENST00000634467 498 ntBASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 AC009229.4-201ENST00000623854 1947 ntBASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
COL17A1Q9UMD9 MTCO1P12-201ENST00000414273 1543 ntBASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 YES1-203ENST00000577961 4554 ntTSL 5 BASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 RNA5SP175-201ENST00000364275 119 ntBASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 SNORD65.1-201ENST00000390889 71 ntBASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 RPS20P14-201ENST00000412545 360 ntBASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 AL121878.1-201ENST00000418638 859 ntBASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 OR1AA1P-201ENST00000419597 916 ntBASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 SLC44A3-AS1-205ENST00000424505 612 ntBASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 OFD1P12Y-201ENST00000427963 1207 ntBASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 PPIAP17-201ENST00000438507 471 ntBASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 COX6CP12-201ENST00000446748 202 ntBASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 ARPC3P5-201ENST00000448802 534 ntBASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 OR6C5P-201ENST00000452388 923 ntBASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 RPL23AP81-201ENST00000455252 467 ntBASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 BX510359.1-201ENST00000456973 237 ntBASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 AC108751.2-201ENST00000469993 231 ntBASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 AC110792.1-201ENST00000491826 472 ntBASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 AC104164.2-201ENST00000496953 495 ntBASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 DYNLL1P6-201ENST00000503440 264 ntBASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 RNU6-1004P-201ENST00000516584 111 ntBASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 RN7SKP289-201ENST00000517244 295 ntBASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 IGHV3-63-201ENST00000518422 341 ntBASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 AC004817.2-201ENST00000561794 651 ntBASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 AC090312.1-201ENST00000580637 348 ntBASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 AC120349.2-201ENST00000625002 298 ntBASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.37□□□□□ -1.39
COL17A1Q9UMD9 AL049781.1-201ENST00000623195 3585 ntBASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 RNU5F-7P-201ENST00000363696 115 ntBASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 RNU6-621P-201ENST00000364752 109 ntBASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 RNU6-780P-201ENST00000391030 104 ntBASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 AC007066.1-201ENST00000392902 381 ntBASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 AL353193.1-201ENST00000421444 268 ntBASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 RPL31P54-201ENST00000429803 370 ntBASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 TAAR7P-201ENST00000436141 242 ntBASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 RPS4XP4-201ENST00000443195 763 ntBASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC6.36□□□□□ -1.39
COL17A1Q9UMD9 AC233279.1-201ENST00000455300 423 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms