Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 CUL4AP1-201ENST00000514750 1863 ntBASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
NOTCH3Q9UM47 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 AC027228.2-201ENST00000567141 2154 ntBASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 NCOA4P2-201ENST00000340589 1813 ntBASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 AC073055.1-201ENST00000456901 1621 ntBASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 DCAF13P3-201ENST00000561147 1334 ntBASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 MIR7-3-201ENST00000384898 110 ntBASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 RNA5SP36-201ENST00000410197 133 ntBASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 RPL31P54-201ENST00000429803 370 ntBASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 AC007389.2-201ENST00000434630 306 ntBASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 CYCSP32-201ENST00000440548 321 ntBASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 PSPHP1-201ENST00000450062 261 ntBASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 PTP4A1P4-201ENST00000512479 322 ntBASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 AC005832.3-201ENST00000537929 631 ntBASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 AC106782.4-201ENST00000568264 210 ntBASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 AL139286.1-201ENST00000604465 483 ntBASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 AL035413.2-201ENST00000604801 525 ntBASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 AC009233.1-201ENST00000616477 371 ntBASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 MIR6891-201ENST00000618788 93 ntBASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.21□□□□□ -1.89
NOTCH3Q9UM47 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 CCT4P2-201ENST00000233836 1548 ntBASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 RNU1-14P-201ENST00000362759 152 ntBASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 RNU6-374P-201ENST00000364146 108 ntBASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 SNORA4.1-201ENST00000364263 144 ntBASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 RNU1-63P-201ENST00000383902 164 ntBASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 Y_RNA.573-201ENST00000384763 105 ntBASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 AL356432.1-201ENST00000405809 419 ntBASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 GTF2IP23-201ENST00000423746 351 ntBASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 ARPC3P5-201ENST00000448802 534 ntBASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 KLRA1P-201ENST00000503499 986 ntBASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 AC114786.4-201ENST00000508771 728 ntBASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 RNU6-943P-201ENST00000516960 98 ntBASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 RNU6-264P-201ENST00000517134 104 ntBASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 OR4C2P-201ENST00000530855 1064 ntBASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 CYP2C60P-201ENST00000566088 139 ntBASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 AC016925.2-201ENST00000605108 242 ntBASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 BNIP3P10-201ENST00000605360 577 ntBASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 AC008966.2-201ENST00000606157 453 ntBASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 AL138721.1-201ENST00000616756 179 ntBASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
NOTCH3Q9UM47 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 RNA5SP432-201ENST00000362480 116 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 SNORD56.2-201ENST00000363242 71 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 MIR218-2-201ENST00000385006 110 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 MIR559-201ENST00000385188 96 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 PTMAP5-201ENST00000393073 333 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AL121878.1-201ENST00000418638 859 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AL353729.1-201ENST00000425044 720 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 HMGN2P31-201ENST00000432430 273 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 Z98949.2-201ENST00000440996 144 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 IPO7P1-201ENST00000442031 636 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AL033528.1-201ENST00000453780 140 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 DDX39BP2-208ENST00000453923 258 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 FGF7P3-201ENST00000454645 303 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 AC018710.1-201ENST00000506509 158 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 SNORA18.6-201ENST00000516792 115 ntBASIC3.2□□□□□ -1.9
NOTCH3Q9UM47 RNU6-794P-201ENST00000517261 64 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms