Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC2.96□□□□□ -1.94
SCN11AQ9UI33 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.96□□□□□ -1.94
SCN11AQ9UI33 Z98742.2-201ENST00000431564 187 ntBASIC2.96□□□□□ -1.94
SCN11AQ9UI33 RNA5SP309-201ENST00000516670 106 ntBASIC2.96□□□□□ -1.94
SCN11AQ9UI33 OR5D17P-201ENST00000531492 978 ntBASIC2.96□□□□□ -1.94
SCN11AQ9UI33 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.96□□□□□ -1.94
SCN11AQ9UI33 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC2.96□□□□□ -1.94
SCN11AQ9UI33 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.96□□□□□ -1.94
SCN11AQ9UI33 MTCO3P13-201ENST00000577757 781 ntBASIC2.96□□□□□ -1.94
SCN11AQ9UI33 AC080128.1-201ENST00000474389 1917 ntBASIC2.96□□□□□ -1.94
SCN11AQ9UI33 NSRP1P1-201ENST00000444067 1693 ntBASIC2.96□□□□□ -1.94
SCN11AQ9UI33 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
SCN11AQ9UI33 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.96□□□□□ -1.94
SCN11AQ9UI33 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.95□□□□□ -1.94
SCN11AQ9UI33 MTCO1P14-201ENST00000441695 1559 ntBASIC2.95□□□□□ -1.94
SCN11AQ9UI33 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.95□□□□□ -1.94
SCN11AQ9UI33 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
SCN11AQ9UI33 AC239798.3-201ENST00000454459 408 ntBASIC2.95□□□□□ -1.94
SCN11AQ9UI33 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.95□□□□□ -1.94
SCN11AQ9UI33 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.95□□□□□ -1.94
SCN11AQ9UI33 AC025281.1-201ENST00000567026 265 ntBASIC2.95□□□□□ -1.94
SCN11AQ9UI33 AC022884.3-201ENST00000579571 248 ntBASIC2.95□□□□□ -1.94
SCN11AQ9UI33 AC009318.2-201ENST00000610917 651 ntBASIC2.95□□□□□ -1.94
SCN11AQ9UI33 CR589904.2-201ENST00000612533 440 ntBASIC2.95□□□□□ -1.94
SCN11AQ9UI33 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
SCN11AQ9UI33 BX005019.1-201ENST00000561881 1810 ntBASIC2.95□□□□□ -1.94
SCN11AQ9UI33 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.95□□□□□ -1.94
SCN11AQ9UI33 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.95□□□□□ -1.94
SCN11AQ9UI33 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
SCN11AQ9UI33 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
SCN11AQ9UI33 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.95□□□□□ -1.94
SCN11AQ9UI33 AL139156.1-201ENST00000412785 841 ntBASIC2.95□□□□□ -1.94
SCN11AQ9UI33 SDCBPP3-201ENST00000419629 891 ntBASIC2.95□□□□□ -1.94
SCN11AQ9UI33 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.95□□□□□ -1.94
SCN11AQ9UI33 AL592045.1-201ENST00000429867 352 ntBASIC2.95□□□□□ -1.94
SCN11AQ9UI33 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.95□□□□□ -1.94
SCN11AQ9UI33 TPMTP1-201ENST00000592307 737 ntBASIC2.95□□□□□ -1.94
SCN11AQ9UI33 AL645944.1-201ENST00000603857 493 ntBASIC2.95□□□□□ -1.94
SCN11AQ9UI33 ZNF355P-201ENST00000427301 3216 ntBASIC2.94□□□□□ -1.94
SCN11AQ9UI33 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
SCN11AQ9UI33 SNORD21-201ENST00000383953 95 ntBASIC2.94□□□□□ -1.94
SCN11AQ9UI33 RN7SKP32-201ENST00000410167 303 ntBASIC2.94□□□□□ -1.94
SCN11AQ9UI33 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.94□□□□□ -1.94
SCN11AQ9UI33 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.94□□□□□ -1.94
SCN11AQ9UI33 AL138787.1-202ENST00000437804 898 ntBASIC2.94□□□□□ -1.94
SCN11AQ9UI33 AP003467.2-201ENST00000520175 319 ntBASIC2.94□□□□□ -1.94
SCN11AQ9UI33 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.94□□□□□ -1.94
SCN11AQ9UI33 AC018630.1-201ENST00000541376 925 ntBASIC2.94□□□□□ -1.94
SCN11AQ9UI33 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC2.94□□□□□ -1.94
SCN11AQ9UI33 AL160394.1-201ENST00000624765 724 ntBASIC2.94□□□□□ -1.94
SCN11AQ9UI33 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.94□□□□□ -1.94
SCN11AQ9UI33 AL592437.2-201ENST00000421655 2434 ntBASIC2.93□□□□□ -1.94
SCN11AQ9UI33 AC002543.1-201ENST00000299783 1954 ntBASIC2.93□□□□□ -1.94
SCN11AQ9UI33 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
SCN11AQ9UI33 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.93□□□□□ -1.94
SCN11AQ9UI33 RN7SKP282-201ENST00000516824 299 ntBASIC2.93□□□□□ -1.94
SCN11AQ9UI33 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC2.93□□□□□ -1.94
SCN11AQ9UI33 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.93□□□□□ -1.94
SCN11AQ9UI33 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.93□□□□□ -1.94
SCN11AQ9UI33 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
SCN11AQ9UI33 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC2.93□□□□□ -1.94
SCN11AQ9UI33 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.93□□□□□ -1.94
SCN11AQ9UI33 Xist_exon1.1-201ENST00000618930 85 ntBASIC2.93□□□□□ -1.94
SCN11AQ9UI33 AC009831.4-201ENST00000620744 325 ntBASIC2.93□□□□□ -1.94
SCN11AQ9UI33 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.93□□□□□ -1.94
SCN11AQ9UI33 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
SCN11AQ9UI33 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
SCN11AQ9UI33 DCAF13P3-201ENST00000561147 1334 ntBASIC2.92□□□□□ -1.94
SCN11AQ9UI33 AC107081.1-201ENST00000414975 361 ntBASIC2.92□□□□□ -1.94
SCN11AQ9UI33 RPL31P45-201ENST00000419532 356 ntBASIC2.92□□□□□ -1.94
SCN11AQ9UI33 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC2.92□□□□□ -1.94
SCN11AQ9UI33 CEACAMP4-201ENST00000457676 421 ntBASIC2.92□□□□□ -1.94
SCN11AQ9UI33 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.92□□□□□ -1.94
SCN11AQ9UI33 AC107222.1-201ENST00000510899 637 ntBASIC2.92□□□□□ -1.94
SCN11AQ9UI33 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SCN11AQ9UI33 RN7SKP219-201ENST00000516825 296 ntBASIC2.92□□□□□ -1.94
SCN11AQ9UI33 HMGB1P41-201ENST00000520234 440 ntBASIC2.92□□□□□ -1.94
SCN11AQ9UI33 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.92□□□□□ -1.94
SCN11AQ9UI33 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC2.92□□□□□ -1.94
SCN11AQ9UI33 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC2.92□□□□□ -1.94
SCN11AQ9UI33 AP000942.3-201ENST00000603702 160 ntBASIC2.92□□□□□ -1.94
SCN11AQ9UI33 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.92□□□□□ -1.94
SCN11AQ9UI33 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC2.92□□□□□ -1.94
SCN11AQ9UI33 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
SCN11AQ9UI33 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.92□□□□□ -1.94
SCN11AQ9UI33 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.92□□□□□ -1.94
SCN11AQ9UI33 MIR21-201ENST00000362134 72 ntBASIC2.92□□□□□ -1.94
SCN11AQ9UI33 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.92□□□□□ -1.94
SCN11AQ9UI33 GSTA9P-201ENST00000406231 611 ntBASIC2.92□□□□□ -1.94
SCN11AQ9UI33 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.92□□□□□ -1.94
SCN11AQ9UI33 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
SCN11AQ9UI33 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.92□□□□□ -1.94
SCN11AQ9UI33 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.92□□□□□ -1.94
SCN11AQ9UI33 MTND4P2-201ENST00000507767 1203 ntBASIC2.92□□□□□ -1.94
SCN11AQ9UI33 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
SCN11AQ9UI33 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.92□□□□□ -1.94
SCN11AQ9UI33 AC105137.2-201ENST00000569073 466 ntBASIC2.92□□□□□ -1.94
SCN11AQ9UI33 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC2.92□□□□□ -1.94
SCN11AQ9UI33 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC2.92□□□□□ -1.94
SCN11AQ9UI33 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms