Protein–RNA interactions for Protein: Q9UHC9

NPC1L1, Niemann-Pick C1-like protein 1, humanhuman

Predictions only

Length 1,359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1Q9UHC9 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 BNIP3P4-201ENST00000604946 565 ntBASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 AC099778.2-201ENST00000610904 211 ntBASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 AL671511.2-201ENST00000611838 659 ntTSL 2 BASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 AC068880.4-201ENST00000623082 495 ntBASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 AC004943.3-201ENST00000624116 600 ntBASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.93□□□□□ -1.78
NPC1L1Q9UHC9 RNU6-468P-201ENST00000384003 109 ntBASIC3.92□□□□□ -1.78
NPC1L1Q9UHC9 MTND4LP20-201ENST00000402379 270 ntBASIC3.92□□□□□ -1.78
NPC1L1Q9UHC9 PRRC2CP1-201ENST00000404428 159 ntBASIC3.92□□□□□ -1.78
NPC1L1Q9UHC9 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC3.92□□□□□ -1.78
NPC1L1Q9UHC9 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.92□□□□□ -1.78
NPC1L1Q9UHC9 AC233982.1-201ENST00000451247 436 ntBASIC3.92□□□□□ -1.78
NPC1L1Q9UHC9 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
NPC1L1Q9UHC9 AC090071.1-201ENST00000507713 644 ntBASIC3.92□□□□□ -1.78
NPC1L1Q9UHC9 AC026801.2-201ENST00000515352 425 ntBASIC3.92□□□□□ -1.78
NPC1L1Q9UHC9 RNU5A-7P-201ENST00000515979 116 ntBASIC3.92□□□□□ -1.78
NPC1L1Q9UHC9 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.92□□□□□ -1.78
NPC1L1Q9UHC9 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.92□□□□□ -1.78
NPC1L1Q9UHC9 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.92□□□□□ -1.78
NPC1L1Q9UHC9 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.92□□□□□ -1.78
NPC1L1Q9UHC9 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC3.92□□□□□ -1.78
NPC1L1Q9UHC9 AC091488.1-201ENST00000604239 660 ntBASIC3.92□□□□□ -1.78
NPC1L1Q9UHC9 AC113194.1-201ENST00000606037 500 ntBASIC3.92□□□□□ -1.78
NPC1L1Q9UHC9 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
NPC1L1Q9UHC9 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPC1L1Q9UHC9 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPC1L1Q9UHC9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPC1L1Q9UHC9 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
NPC1L1Q9UHC9 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.92□□□□□ -1.78
NPC1L1Q9UHC9 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
NPC1L1Q9UHC9 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.91□□□□□ -1.78
NPC1L1Q9UHC9 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.91□□□□□ -1.78
NPC1L1Q9UHC9 EEF1A1P41-201ENST00000414667 207 ntBASIC3.91□□□□□ -1.78
NPC1L1Q9UHC9 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.91□□□□□ -1.78
NPC1L1Q9UHC9 AL645937.1-202ENST00000421799 937 ntBASIC3.91□□□□□ -1.78
NPC1L1Q9UHC9 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.91□□□□□ -1.78
NPC1L1Q9UHC9 VDAC1P3-201ENST00000434069 851 ntBASIC3.91□□□□□ -1.78
NPC1L1Q9UHC9 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC3.91□□□□□ -1.78
NPC1L1Q9UHC9 AC093156.1-201ENST00000440382 670 ntBASIC3.91□□□□□ -1.78
NPC1L1Q9UHC9 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.91□□□□□ -1.78
NPC1L1Q9UHC9 NIPA2P5-201ENST00000452282 464 ntBASIC3.91□□□□□ -1.78
NPC1L1Q9UHC9 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.91□□□□□ -1.78
NPC1L1Q9UHC9 RPL37P6-202ENST00000464216 403 ntBASIC3.91□□□□□ -1.78
NPC1L1Q9UHC9 AC126121.1-201ENST00000482313 553 ntBASIC3.91□□□□□ -1.78
NPC1L1Q9UHC9 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.91□□□□□ -1.78
NPC1L1Q9UHC9 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC3.91□□□□□ -1.78
NPC1L1Q9UHC9 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.91□□□□□ -1.78
NPC1L1Q9UHC9 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.91□□□□□ -1.78
NPC1L1Q9UHC9 OR2AS2P-201ENST00000606902 342 ntBASIC3.91□□□□□ -1.78
NPC1L1Q9UHC9 AL109659.3-201ENST00000624985 950 ntBASIC3.91□□□□□ -1.78
NPC1L1Q9UHC9 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.91□□□□□ -1.78
NPC1L1Q9UHC9 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NPC1L1Q9UHC9 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NPC1L1Q9UHC9 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.91□□□□□ -1.78
NPC1L1Q9UHC9 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 RNU1-35P-201ENST00000362782 153 ntBASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 RNU6-932P-201ENST00000391108 106 ntBASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 SNORA48.8-201ENST00000391324 134 ntBASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 RNU6-77P-201ENST00000410554 91 ntBASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 MTND1P33-201ENST00000446251 917 ntBASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 AL096829.2-201ENST00000446582 742 ntBASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 RPL29P29-201ENST00000448725 423 ntBASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 RPS20P32-201ENST00000456044 356 ntBASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 HMGN2P7-201ENST00000456186 273 ntBASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 POU5F1P7-201ENST00000508759 541 ntBASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 PRELID3BP4-201ENST00000515476 571 ntBASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 RNA5SP356-201ENST00000515972 94 ntBASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 RN7SKP234-201ENST00000517173 224 ntBASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 CENPUP2-201ENST00000555897 1186 ntBASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 AC090115.4-201ENST00000609970 188 ntBASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 Z99129.2-201ENST00000619967 314 ntBASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 AC022509.4-201ENST00000621404 572 ntBASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 MTND5P19-201ENST00000424872 1794 ntBASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.9□□□□□ -1.78
NPC1L1Q9UHC9 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
NPC1L1Q9UHC9 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 RNU6-272P-201ENST00000411028 104 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AL451074.5-201ENST00000415894 435 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AL513175.1-201ENST00000431492 780 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AC009969.1-201ENST00000438726 172 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AC004865.1-201ENST00000442276 1003 ntBASIC3.89□□□□□ -1.79
NPC1L1Q9UHC9 AL929288.2-201ENST00000446368 407 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms