Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.73□□□□□ -1.49
CNTN3Q9P232 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC5.73□□□□□ -1.49
CNTN3Q9P232 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNTN3Q9P232 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNTN3Q9P232 AC090971.4-201ENST00000560291 1800 ntBASIC5.73□□□□□ -1.49
CNTN3Q9P232 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNTN3Q9P232 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.73□□□□□ -1.49
CNTN3Q9P232 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
CNTN3Q9P232 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
CNTN3Q9P232 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.73□□□□□ -1.49
CNTN3Q9P232 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
CNTN3Q9P232 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
CNTN3Q9P232 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CNTN3Q9P232 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.72□□□□□ -1.49
CNTN3Q9P232 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CNTN3Q9P232 BCORP1-203ENST00000513194 5093 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.72□□□□□ -1.49
CNTN3Q9P232 AC066616.2-201ENST00000559334 1481 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CNTN3Q9P232 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.72□□□□□ -1.49
CNTN3Q9P232 U3.3-201ENST00000362986 216 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 RNA5SP507-201ENST00000363603 121 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 SNORA70-201ENST00000384436 135 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 MIR765-201ENST00000390226 114 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
CNTN3Q9P232 U3.36-201ENST00000408418 213 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 RNU2-15P-201ENST00000410692 191 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 RPL23AP27-201ENST00000415161 451 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 AL133482.1-201ENST00000415988 498 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 AC113618.1-201ENST00000416747 285 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.72□□□□□ -1.49
CNTN3Q9P232 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 FABP5P14-201ENST00000437273 393 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 PTMAP6-201ENST00000439110 327 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 RPL21P133-201ENST00000443666 476 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC5.72□□□□□ -1.49
CNTN3Q9P232 Y_RNA.653-201ENST00000459091 95 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.72□□□□□ -1.49
CNTN3Q9P232 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.72□□□□□ -1.49
CNTN3Q9P232 AC016559.2-201ENST00000510759 359 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 RN7SKP24-201ENST00000515888 284 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 RN7SKP82-201ENST00000516786 223 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.72□□□□□ -1.49
CNTN3Q9P232 COPS8P3-201ENST00000526024 482 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.72□□□□□ -1.49
CNTN3Q9P232 APPL2-203ENST00000546731 684 ntTSL 2 BASIC5.72□□□□□ -1.49
CNTN3Q9P232 HMGN2P6-201ENST00000551091 273 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 IMMP1LP2-201ENST00000552954 492 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.72□□□□□ -1.49
CNTN3Q9P232 AL118558.2-201ENST00000556294 238 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 AC044860.2-201ENST00000561005 179 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC5.72□□□□□ -1.49
CNTN3Q9P232 7SK.7-201ENST00000603504 247 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 AC108738.1-201ENST00000603703 237 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 AL390240.1-201ENST00000612950 384 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.72□□□□□ -1.49
CNTN3Q9P232 MIR7155-201ENST00000615925 56 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 TTK-211ENST00000627129 240 ntTSL 5 BASIC5.72□□□□□ -1.49
CNTN3Q9P232 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
CNTN3Q9P232 AC092747.4-201ENST00000620519 1861 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CNTN3Q9P232 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
CNTN3Q9P232 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CNTN3Q9P232 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CNTN3Q9P232 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CNTN3Q9P232 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.72□□□□□ -1.49
CNTN3Q9P232 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
CNTN3Q9P232 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
CNTN3Q9P232 AL359922.3-201ENST00000624779 1670 ntBASIC5.72□□□□□ -1.49
CNTN3Q9P232 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.72□□□□□ -1.49
CNTN3Q9P232 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
CNTN3Q9P232 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
CNTN3Q9P232 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.49
CNTN3Q9P232 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
CNTN3Q9P232 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
CNTN3Q9P232 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.71□□□□□ -1.5
CNTN3Q9P232 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNTN3Q9P232 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
CNTN3Q9P232 Y_RNA.378-201ENST00000365652 113 ntBASIC5.71□□□□□ -1.5
CNTN3Q9P232 RNU1-106P-201ENST00000384382 164 ntBASIC5.71□□□□□ -1.5
CNTN3Q9P232 RNU6-331P-201ENST00000384724 107 ntBASIC5.71□□□□□ -1.5
CNTN3Q9P232 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
CNTN3Q9P232 CEACAMP1-201ENST00000434624 1035 ntBASIC5.71□□□□□ -1.5
CNTN3Q9P232 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.71□□□□□ -1.5
CNTN3Q9P232 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC5.71□□□□□ -1.5
CNTN3Q9P232 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.71□□□□□ -1.5
CNTN3Q9P232 AC016696.1-201ENST00000446949 318 ntBASIC5.71□□□□□ -1.5
CNTN3Q9P232 AL591623.2-201ENST00000449978 222 ntBASIC5.71□□□□□ -1.5
CNTN3Q9P232 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.71□□□□□ -1.5
CNTN3Q9P232 AL353691.1-201ENST00000451332 387 ntBASIC5.71□□□□□ -1.5
CNTN3Q9P232 ELOCP24-201ENST00000456370 334 ntBASIC5.71□□□□□ -1.5
CNTN3Q9P232 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.71□□□□□ -1.5
CNTN3Q9P232 RPS18P6-201ENST00000476880 458 ntBASIC5.71□□□□□ -1.5
CNTN3Q9P232 AL135752.1-201ENST00000479477 471 ntBASIC5.71□□□□□ -1.5
CNTN3Q9P232 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.71□□□□□ -1.5
CNTN3Q9P232 COX7A2P2-201ENST00000505291 250 ntBASIC5.71□□□□□ -1.5
CNTN3Q9P232 AL137161.1-201ENST00000532231 390 ntBASIC5.71□□□□□ -1.5
CNTN3Q9P232 AC092470.1-201ENST00000546187 132 ntBASIC5.71□□□□□ -1.5
CNTN3Q9P232 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC5.71□□□□□ -1.5
CNTN3Q9P232 AP000654.2-201ENST00000605633 586 ntBASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms