Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC88CQ9P219 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC88CQ9P219 RNA5SP108-201ENST00000605921 117 ntBASIC2.44□□□□□ -2.02
CCDC88CQ9P219 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC88CQ9P219 AP003072.4-201ENST00000624580 310 ntBASIC2.44□□□□□ -2.02
CCDC88CQ9P219 CTSLP2-204ENST00000629029 392 ntBASIC2.44□□□□□ -2.02
CCDC88CQ9P219 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.44□□□□□ -2.02
CCDC88CQ9P219 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC88CQ9P219 AC046144.1-201ENST00000478559 1853 ntBASIC2.44□□□□□ -2.02
CCDC88CQ9P219 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC88CQ9P219 RNA5SP189-201ENST00000364920 115 ntBASIC2.44□□□□□ -2.02
CCDC88CQ9P219 AC013404.1-201ENST00000413068 249 ntBASIC2.44□□□□□ -2.02
CCDC88CQ9P219 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.44□□□□□ -2.02
CCDC88CQ9P219 SETP8-201ENST00000435341 628 ntBASIC2.44□□□□□ -2.02
CCDC88CQ9P219 AC146507.1-201ENST00000468335 354 ntBASIC2.44□□□□□ -2.02
CCDC88CQ9P219 AC005912.1-201ENST00000495392 255 ntBASIC2.44□□□□□ -2.02
CCDC88CQ9P219 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC88CQ9P219 RN7SKP82-201ENST00000516786 223 ntBASIC2.44□□□□□ -2.02
CCDC88CQ9P219 AP001207.1-201ENST00000524051 481 ntBASIC2.44□□□□□ -2.02
CCDC88CQ9P219 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.44□□□□□ -2.02
CCDC88CQ9P219 AC011468.4-201ENST00000603942 409 ntBASIC2.44□□□□□ -2.02
CCDC88CQ9P219 AC005021.1-201ENST00000608730 355 ntBASIC2.44□□□□□ -2.02
CCDC88CQ9P219 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC88CQ9P219 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC88CQ9P219 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
CCDC88CQ9P219 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC88CQ9P219 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC88CQ9P219 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
CCDC88CQ9P219 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC88CQ9P219 AC097714.1-201ENST00000511272 1647 ntBASIC2.43□□□□□ -2.02
CCDC88CQ9P219 RNU6-666P-201ENST00000363499 107 ntBASIC2.43□□□□□ -2.02
CCDC88CQ9P219 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC88CQ9P219 SNORA70B-201ENST00000384210 135 ntBASIC2.43□□□□□ -2.02
CCDC88CQ9P219 HNRNPDP2-201ENST00000406475 478 ntBASIC2.43□□□□□ -2.02
CCDC88CQ9P219 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC88CQ9P219 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.43□□□□□ -2.02
CCDC88CQ9P219 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC88CQ9P219 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC88CQ9P219 AL121578.1-201ENST00000428051 892 ntBASIC2.43□□□□□ -2.02
CCDC88CQ9P219 MTATP6P11-201ENST00000428071 670 ntBASIC2.43□□□□□ -2.02
CCDC88CQ9P219 AC104332.2-201ENST00000429959 156 ntBASIC2.43□□□□□ -2.02
CCDC88CQ9P219 AL139415.2-201ENST00000431968 163 ntBASIC2.43□□□□□ -2.02
CCDC88CQ9P219 MRPL50P4-201ENST00000446432 475 ntBASIC2.43□□□□□ -2.02
CCDC88CQ9P219 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC88CQ9P219 TRBV12-1-201ENST00000479785 344 ntBASIC2.43□□□□□ -2.02
CCDC88CQ9P219 RN7SL636P-201ENST00000497504 294 ntBASIC2.43□□□□□ -2.02
CCDC88CQ9P219 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC2.43□□□□□ -2.02
CCDC88CQ9P219 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.43□□□□□ -2.02
CCDC88CQ9P219 CKS1BP7-201ENST00000522230 235 ntBASIC2.43□□□□□ -2.02
CCDC88CQ9P219 AC022616.2-201ENST00000523185 300 ntBASIC2.43□□□□□ -2.02
CCDC88CQ9P219 AL133271.1-201ENST00000538229 291 ntBASIC2.43□□□□□ -2.02
CCDC88CQ9P219 OR4U1P-201ENST00000554958 912 ntBASIC2.43□□□□□ -2.02
CCDC88CQ9P219 AC107294.1-201ENST00000609524 467 ntBASIC2.43□□□□□ -2.02
CCDC88CQ9P219 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC88CQ9P219 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CCDC88CQ9P219 AC103988.1-201ENST00000566382 2177 ntBASIC2.43□□□□□ -2.02
CCDC88CQ9P219 FAM35BP-202ENST00000497389 3337 ntBASIC2.43□□□□□ -2.02
CCDC88CQ9P219 U8.9-201ENST00000365667 134 ntBASIC2.42□□□□□ -2.02
CCDC88CQ9P219 MIR887-201ENST00000401258 79 ntBASIC2.42□□□□□ -2.02
CCDC88CQ9P219 RNA5SP425-201ENST00000410336 112 ntBASIC2.42□□□□□ -2.02
CCDC88CQ9P219 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC2.42□□□□□ -2.02
CCDC88CQ9P219 AC073310.1-201ENST00000423226 1033 ntBASIC2.42□□□□□ -2.02
CCDC88CQ9P219 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC88CQ9P219 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.42□□□□□ -2.02
CCDC88CQ9P219 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC88CQ9P219 AC111193.1-201ENST00000504097 155 ntBASIC2.42□□□□□ -2.02
CCDC88CQ9P219 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC88CQ9P219 UBTFL10-201ENST00000528532 562 ntBASIC2.42□□□□□ -2.02
CCDC88CQ9P219 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.42□□□□□ -2.02
CCDC88CQ9P219 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.42□□□□□ -2.02
CCDC88CQ9P219 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC88CQ9P219 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
CCDC88CQ9P219 MIR6817-201ENST00000615588 66 ntBASIC2.42□□□□□ -2.02
CCDC88CQ9P219 AC064859.1-201ENST00000624741 174 ntBASIC2.42□□□□□ -2.02
CCDC88CQ9P219 AC116096.1-201ENST00000566804 2314 ntBASIC2.42□□□□□ -2.02
CCDC88CQ9P219 MTCO1P24-201ENST00000515438 1558 ntBASIC2.42□□□□□ -2.02
CCDC88CQ9P219 RNA5SP126-201ENST00000365092 109 ntBASIC2.42□□□□□ -2.02
CCDC88CQ9P219 EIF5P1-201ENST00000400019 1231 ntBASIC2.42□□□□□ -2.02
CCDC88CQ9P219 BTF3P7-201ENST00000407097 488 ntBASIC2.42□□□□□ -2.02
CCDC88CQ9P219 RNA5SP181-201ENST00000410246 98 ntBASIC2.42□□□□□ -2.02
CCDC88CQ9P219 ELOCP11-201ENST00000436690 332 ntBASIC2.42□□□□□ -2.02
CCDC88CQ9P219 RPS12P2-201ENST00000439728 269 ntBASIC2.42□□□□□ -2.02
CCDC88CQ9P219 ELOCP16-201ENST00000444494 332 ntBASIC2.42□□□□□ -2.02
CCDC88CQ9P219 AC093392.2-201ENST00000450682 337 ntBASIC2.42□□□□□ -2.02
CCDC88CQ9P219 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC88CQ9P219 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC88CQ9P219 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC2.42□□□□□ -2.02
CCDC88CQ9P219 KLHL2P1-201ENST00000508691 521 ntBASIC2.42□□□□□ -2.02
CCDC88CQ9P219 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.42□□□□□ -2.02
CCDC88CQ9P219 RNU2-58P-201ENST00000516403 183 ntBASIC2.42□□□□□ -2.02
CCDC88CQ9P219 OR4V1P-201ENST00000525394 1140 ntBASIC2.42□□□□□ -2.02
CCDC88CQ9P219 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.42□□□□□ -2.02
CCDC88CQ9P219 AC008083.2-201ENST00000546707 476 ntBASIC2.42□□□□□ -2.02
CCDC88CQ9P219 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.42□□□□□ -2.02
CCDC88CQ9P219 AC022079.2-201ENST00000619739 566 ntBASIC2.42□□□□□ -2.02
CCDC88CQ9P219 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC2.42□□□□□ -2.02
CCDC88CQ9P219 MIR4496-201ENST00000635896 61 ntBASIC2.42□□□□□ -2.02
CCDC88CQ9P219 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.42□□□□□ -2.02
CCDC88CQ9P219 AC069528.2-201ENST00000624849 1991 ntBASIC2.41□□□□□ -2.02
CCDC88CQ9P219 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 139.3 ms