Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 AC009039.2-201ENST00000624524 529 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 AC048347.1-201ENST00000624621 427 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 AC026634.1-201ENST00000634369 198 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.45□□□□□ -1.86
NDE1Q9NXR1 AC005539.1-201ENST00000443768 1479 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 DBF4P1-201ENST00000412976 1892 ntBASIC3.45□□□□□ -1.86
NDE1Q9NXR1 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NDE1Q9NXR1 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NDE1Q9NXR1 Y_RNA.25-201ENST00000362528 102 ntBASIC3.44□□□□□ -1.86
NDE1Q9NXR1 RNU6-251P-201ENST00000363235 104 ntBASIC3.44□□□□□ -1.86
NDE1Q9NXR1 RNU6-621P-201ENST00000364752 109 ntBASIC3.44□□□□□ -1.86
NDE1Q9NXR1 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NDE1Q9NXR1 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AC098592.1-201ENST00000419352 333 ntBASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.44□□□□□ -1.86
NDE1Q9NXR1 RPL23AP82-202ENST00000427528 469 ntBASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AL591503.2-201ENST00000442314 1005 ntBASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AC092754.2-201ENST00000463506 460 ntBASIC3.44□□□□□ -1.86
NDE1Q9NXR1 CENPBD1P1-201ENST00000464061 469 ntBASIC3.44□□□□□ -1.86
NDE1Q9NXR1 NCOR1P1-202ENST00000486162 291 ntBASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
NDE1Q9NXR1 HMGB1P21-201ENST00000502313 581 ntBASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AC147055.4-201ENST00000504399 745 ntBASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AC010486.3-201ENST00000511602 785 ntBASIC3.44□□□□□ -1.86
NDE1Q9NXR1 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AC107934.2-201ENST00000518653 310 ntBASIC3.44□□□□□ -1.86
NDE1Q9NXR1 NAT2-202ENST00000520116 716 ntTSL 3 BASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AC027309.2-201ENST00000520566 192 ntBASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.44□□□□□ -1.86
NDE1Q9NXR1 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.44□□□□□ -1.86
NDE1Q9NXR1 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.44□□□□□ -1.86
NDE1Q9NXR1 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AC023161.2-201ENST00000551218 780 ntBASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AC074051.3-201ENST00000570238 358 ntBASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC3.44□□□□□ -1.86
NDE1Q9NXR1 VN1R90P-201ENST00000595717 726 ntBASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AC113194.1-201ENST00000606037 500 ntBASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AC107294.3-201ENST00000609211 526 ntBASIC3.44□□□□□ -1.86
NDE1Q9NXR1 VIS1.1-201ENST00000610517 203 ntBASIC3.44□□□□□ -1.86
NDE1Q9NXR1 PLCE1P1-201ENST00000622094 305 ntBASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AP003355.3-201ENST00000623465 114 ntBASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AC120349.2-201ENST00000625002 298 ntBASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AC092184.1-201ENST00000625042 715 ntBASIC3.44□□□□□ -1.86
NDE1Q9NXR1 AC139713.2-214ENST00000642059 1811 ntBASIC3.44□□□□□ -1.86
NDE1Q9NXR1 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.44□□□□□ -1.86
NDE1Q9NXR1 MFSD8-233ENST00000641482 4860 ntBASIC3.44□□□□□ -1.86
NDE1Q9NXR1 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 AC024560.2-201ENST00000507981 1497 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 CDR1-202ENST00000625883 1485 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 RNU4-40P-201ENST00000364351 143 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 RNA5SP130-201ENST00000364431 114 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 SNORA70.2-201ENST00000364506 135 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 RNU6-441P-201ENST00000384545 106 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 AL049693.1-201ENST00000402760 611 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 AL121978.1-201ENST00000402778 359 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 RNU2-21P-201ENST00000410368 188 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 RNU2-28P-201ENST00000410457 189 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 AC234781.2-201ENST00000426370 994 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 TXNL1P1-201ENST00000429528 554 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 YWHAZP7-201ENST00000436906 631 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 SETP5-201ENST00000437270 562 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 AL445567.1-201ENST00000439121 144 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 Z83846.1-201ENST00000446798 265 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 AC239367.2-201ENST00000447309 705 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 AC099794.1-201ENST00000450811 447 ntTSL 3 BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 U3.44-201ENST00000458938 192 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 LINC00888-204ENST00000487386 421 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 MTCYBP17-201ENST00000503579 789 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 KCTD9P5-201ENST00000504141 1170 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 HMGB1P28-201ENST00000507778 552 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 MIR2276-201ENST00000516886 89 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 SLC2A13P1-201ENST00000531560 322 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.43□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 98.1 ms