Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 SUB1P2-201ENST00000556401 297 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 HMGB3P26-201ENST00000560051 582 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AC068135.2-201ENST00000569293 1028 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 MTCO3P24-201ENST00000572729 782 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 RN7SL176P-201ENST00000580352 264 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 HMGB2P1-201ENST00000591146 634 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AL512782.1-201ENST00000603093 364 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AC007363.1-201ENST00000604736 620 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AC007014.2-201ENST00000615581 479 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AC131238.1-201ENST00000617135 328 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AC099494.2-201ENST00000623371 978 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 MIR3688-2-201ENST00000636963 87 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 EOGT-210ENST00000615922 1931 ntBASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
CCM2LQ9NUG4 AC244517.1-201ENST00000606030 2086 ntBASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 RNU1-20P-201ENST00000363314 162 ntBASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 RNU6-282P-201ENST00000365357 103 ntBASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 SNORA62-201ENST00000365493 153 ntBASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 MTCO2P19-201ENST00000427513 598 ntBASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 MTND4P18-201ENST00000447010 465 ntBASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 TPT1P12-201ENST00000448968 492 ntBASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 Z92846.1-201ENST00000456203 268 ntBASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 RPL38P1-201ENST00000460914 211 ntBASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 RPL31P58-201ENST00000469001 379 ntBASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 RN7SL558P-201ENST00000497468 299 ntBASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 AK3P4-201ENST00000504283 583 ntBASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 ARL2BPP6-201ENST00000512757 439 ntBASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 AC008694.2-201ENST00000517591 306 ntBASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 OR5AQ1P-201ENST00000527596 927 ntBASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 AL512310.1-201ENST00000548639 172 ntBASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 MIR3167-201ENST00000579623 85 ntBASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 AC011447.4-201ENST00000587562 111 ntBASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 AC011487.3-201ENST00000593607 453 ntBASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 AC012507.3-201ENST00000603556 477 ntBASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 AC008745.1-201ENST00000604064 271 ntBASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 TUG1_1.1-201ENST00000610654 145 ntBASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCM2LQ9NUG4 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCM2LQ9NUG4 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.6□□□□□ -1.67
CCM2LQ9NUG4 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.6□□□□□ -1.67
CCM2LQ9NUG4 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.6□□□□□ -1.67
CCM2LQ9NUG4 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCM2LQ9NUG4 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.6□□□□□ -1.67
CCM2LQ9NUG4 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.6□□□□□ -1.67
CCM2LQ9NUG4 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCM2LQ9NUG4 OR5J1P-201ENST00000313544 939 ntBASIC4.6□□□□□ -1.67
CCM2LQ9NUG4 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CCM2LQ9NUG4 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCM2LQ9NUG4 RNU1-94P-201ENST00000362627 173 ntBASIC4.6□□□□□ -1.67
CCM2LQ9NUG4 RNU6-1085P-201ENST00000363576 107 ntBASIC4.6□□□□□ -1.67
CCM2LQ9NUG4 RNU1-32P-201ENST00000363937 159 ntBASIC4.6□□□□□ -1.67
CCM2LQ9NUG4 Y_RNA.256-201ENST00000364594 104 ntBASIC4.6□□□□□ -1.67
CCM2LQ9NUG4 Y_RNA.402-201ENST00000383972 102 ntBASIC4.6□□□□□ -1.67
CCM2LQ9NUG4 SNORA70.10-201ENST00000384515 134 ntBASIC4.6□□□□□ -1.67
CCM2LQ9NUG4 MIR600-201ENST00000385007 98 ntBASIC4.6□□□□□ -1.67
CCM2LQ9NUG4 RNU11-4P-201ENST00000391149 133 ntBASIC4.6□□□□□ -1.67
CCM2LQ9NUG4 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCM2LQ9NUG4 VDAC1P9-201ENST00000412766 841 ntBASIC4.6□□□□□ -1.67
CCM2LQ9NUG4 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.6□□□□□ -1.67
CCM2LQ9NUG4 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.6□□□□□ -1.67
CCM2LQ9NUG4 AC007283.2-201ENST00000424739 197 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms