Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.18□□□□□ -1.9
ELL3Q9HB65 AL592295.2-201ENST00000612578 206 ntBASIC3.18□□□□□ -1.9
ELL3Q9HB65 AC140725.3-201ENST00000616193 880 ntBASIC3.18□□□□□ -1.9
ELL3Q9HB65 AC018755.4-201ENST00000619715 454 ntBASIC3.18□□□□□ -1.9
ELL3Q9HB65 AC079684.1-201ENST00000621405 437 ntBASIC3.18□□□□□ -1.9
ELL3Q9HB65 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.18□□□□□ -1.9
ELL3Q9HB65 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.18□□□□□ -1.9
ELL3Q9HB65 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.18□□□□□ -1.9
ELL3Q9HB65 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.18□□□□□ -1.9
ELL3Q9HB65 AC073073.2-201ENST00000609827 2578 ntBASIC3.18□□□□□ -1.9
ELL3Q9HB65 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
ELL3Q9HB65 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
ELL3Q9HB65 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
ELL3Q9HB65 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.18□□□□□ -1.9
ELL3Q9HB65 GDI2P1-201ENST00000429312 1336 ntBASIC3.18□□□□□ -1.9
ELL3Q9HB65 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.17□□□□□ -1.9
ELL3Q9HB65 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ELL3Q9HB65 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
ELL3Q9HB65 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.17□□□□□ -1.9
ELL3Q9HB65 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
ELL3Q9HB65 FAM133CP-201ENST00000332869 704 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
ELL3Q9HB65 SNORA31-201ENST00000362607 130 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 Y_RNA.126-201ENST00000363382 111 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 RN7SKP280-201ENST00000364196 304 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 Y_RNA.548-201ENST00000384656 105 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 RNU6-328P-201ENST00000390887 106 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 SNORA57.1-201ENST00000391227 145 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.17□□□□□ -1.9
ELL3Q9HB65 AL121972.1-201ENST00000402023 252 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 MIR1284-201ENST00000408337 120 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 SNORA3.3-201ENST00000408712 125 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 RNU2-37P-201ENST00000410695 177 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.17□□□□□ -1.9
ELL3Q9HB65 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC3.17□□□□□ -1.9
ELL3Q9HB65 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.17□□□□□ -1.9
ELL3Q9HB65 AC007742.1-201ENST00000425789 329 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 ELOCP26-201ENST00000436067 329 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.17□□□□□ -1.9
ELL3Q9HB65 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC3.17□□□□□ -1.9
ELL3Q9HB65 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.17□□□□□ -1.9
ELL3Q9HB65 AC010655.1-201ENST00000449336 292 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 RPL26P28-201ENST00000451325 435 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 RPS20P24-201ENST00000457473 361 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 AL139099.1-201ENST00000497398 403 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.17□□□□□ -1.9
ELL3Q9HB65 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.17□□□□□ -1.9
ELL3Q9HB65 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.17□□□□□ -1.9
ELL3Q9HB65 HMGB1P22-201ENST00000505315 124 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC3.17□□□□□ -1.9
ELL3Q9HB65 AC034244.1-201ENST00000507687 207 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.17□□□□□ -1.9
ELL3Q9HB65 AC026412.2-201ENST00000512270 1075 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 AC023141.12-201ENST00000512399 199 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 NPM1P41-201ENST00000512920 831 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.17□□□□□ -1.9
ELL3Q9HB65 MTND4LP31-201ENST00000514859 294 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 AC093853.1-201ENST00000515689 483 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 RNU2-58P-201ENST00000516403 183 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.17□□□□□ -1.9
ELL3Q9HB65 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC3.17□□□□□ -1.9
ELL3Q9HB65 DEFB131D-201ENST00000526803 184 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC3.17□□□□□ -1.9
ELL3Q9HB65 AP004242.1-201ENST00000533701 349 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ELL3Q9HB65 ERP27-202ENST00000540097 993 ntTSL 2 BASIC3.17□□□□□ -1.9
ELL3Q9HB65 LRRC34P1-201ENST00000542742 915 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 HSPE1P3-201ENST00000559254 309 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
ELL3Q9HB65 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.17□□□□□ -1.9
ELL3Q9HB65 MIR5685-201ENST00000579080 79 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.17□□□□□ -1.9
ELL3Q9HB65 BNIP3P24-201ENST00000593398 557 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 AC022022.2-201ENST00000602989 360 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 AC012669.1-201ENST00000603209 283 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 AL450489.1-201ENST00000612071 468 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 RNVU1-4-201ENST00000612985 164 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 AC025588.4-201ENST00000615802 908 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 AC021755.4-201ENST00000616620 456 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 AL133383.2-201ENST00000622958 2336 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 RIOK3P1-201ENST00000418778 1528 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 OR5BR1P-201ENST00000524992 1330 ntBASIC3.17□□□□□ -1.9
ELL3Q9HB65 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
ELL3Q9HB65 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.16□□□□□ -1.9
ELL3Q9HB65 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.16□□□□□ -1.9
ELL3Q9HB65 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
ELL3Q9HB65 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
ELL3Q9HB65 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
ELL3Q9HB65 RNA5SP235-201ENST00000365411 114 ntBASIC3.16□□□□□ -1.9
ELL3Q9HB65 SNORD6-201ENST00000365444 73 ntBASIC3.16□□□□□ -1.9
ELL3Q9HB65 U1.1-201ENST00000384101 164 ntBASIC3.16□□□□□ -1.9
ELL3Q9HB65 RNU6-952P-201ENST00000391164 108 ntBASIC3.16□□□□□ -1.9
ELL3Q9HB65 RPL32P23-201ENST00000397237 405 ntBASIC3.16□□□□□ -1.9
ELL3Q9HB65 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC3.16□□□□□ -1.9
ELL3Q9HB65 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.16□□□□□ -1.9
ELL3Q9HB65 HIGD1AP15-201ENST00000416198 280 ntBASIC3.16□□□□□ -1.9
ELL3Q9HB65 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.16□□□□□ -1.9
ELL3Q9HB65 AC006960.1-201ENST00000419980 153 ntBASIC3.16□□□□□ -1.9
ELL3Q9HB65 RPL7P30-201ENST00000420888 709 ntBASIC3.16□□□□□ -1.9
ELL3Q9HB65 AC012065.2-201ENST00000421295 375 ntBASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms