Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.49□□□□□ -1.85
UBQLN3Q9H347 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
UBQLN3Q9H347 AL049610.1-201ENST00000423374 372 ntBASIC3.49□□□□□ -1.85
UBQLN3Q9H347 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.49□□□□□ -1.85
UBQLN3Q9H347 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.49□□□□□ -1.85
UBQLN3Q9H347 HMGN2P16-201ENST00000456802 261 ntBASIC3.49□□□□□ -1.85
UBQLN3Q9H347 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.49□□□□□ -1.85
UBQLN3Q9H347 AC078785.3-201ENST00000476607 425 ntBASIC3.49□□□□□ -1.85
UBQLN3Q9H347 AC084198.1-201ENST00000477747 402 ntBASIC3.49□□□□□ -1.85
UBQLN3Q9H347 AC090453.1-201ENST00000495560 436 ntBASIC3.49□□□□□ -1.85
UBQLN3Q9H347 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
UBQLN3Q9H347 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.49□□□□□ -1.85
UBQLN3Q9H347 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
UBQLN3Q9H347 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.49□□□□□ -1.85
UBQLN3Q9H347 AC010625.1-201ENST00000511296 403 ntBASIC3.49□□□□□ -1.85
UBQLN3Q9H347 USP9YP5-201ENST00000511770 630 ntBASIC3.49□□□□□ -1.85
UBQLN3Q9H347 RNU1-45P-201ENST00000517191 141 ntBASIC3.49□□□□□ -1.85
UBQLN3Q9H347 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.49□□□□□ -1.85
UBQLN3Q9H347 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.49□□□□□ -1.85
UBQLN3Q9H347 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.49□□□□□ -1.85
UBQLN3Q9H347 SYF2P1-201ENST00000550658 413 ntBASIC3.49□□□□□ -1.85
UBQLN3Q9H347 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.49□□□□□ -1.85
UBQLN3Q9H347 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.49□□□□□ -1.85
UBQLN3Q9H347 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.49□□□□□ -1.85
UBQLN3Q9H347 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.49□□□□□ -1.85
UBQLN3Q9H347 AC011468.4-201ENST00000603942 409 ntBASIC3.49□□□□□ -1.85
UBQLN3Q9H347 AC013244.3-201ENST00000605614 388 ntBASIC3.49□□□□□ -1.85
UBQLN3Q9H347 AC107952.2-201ENST00000606048 486 ntBASIC3.49□□□□□ -1.85
UBQLN3Q9H347 AC026790.2-201ENST00000606282 430 ntBASIC3.49□□□□□ -1.85
UBQLN3Q9H347 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.49□□□□□ -1.85
UBQLN3Q9H347 AL355816.2-201ENST00000610049 647 ntBASIC3.49□□□□□ -1.85
UBQLN3Q9H347 AC245297.2-201ENST00000610119 565 ntBASIC3.49□□□□□ -1.85
UBQLN3Q9H347 AC005344.1-201ENST00000613391 459 ntBASIC3.49□□□□□ -1.85
UBQLN3Q9H347 AC039056.2-201ENST00000622261 511 ntBASIC3.49□□□□□ -1.85
UBQLN3Q9H347 AL356863.1-201ENST00000623378 1080 ntBASIC3.49□□□□□ -1.85
UBQLN3Q9H347 AP001148.1-201ENST00000624124 2359 ntBASIC3.49□□□□□ -1.85
UBQLN3Q9H347 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
UBQLN3Q9H347 AP004289.2-201ENST00000444413 1457 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.48□□□□□ -1.85
UBQLN3Q9H347 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
UBQLN3Q9H347 AP000568.1-201ENST00000282964 442 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
UBQLN3Q9H347 FAM133CP-201ENST00000332869 704 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 U8.11-201ENST00000384699 133 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 U8.12-201ENST00000384701 133 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 RPL23AP29-201ENST00000397284 453 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 DHFRP6-201ENST00000401776 268 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 RNU6-757P-201ENST00000410334 100 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 USP9YP33-201ENST00000412220 421 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 HIGD1AP15-201ENST00000416198 280 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 RPL22P18-201ENST00000417197 377 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.48□□□□□ -1.85
UBQLN3Q9H347 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.48□□□□□ -1.85
UBQLN3Q9H347 AC019178.2-201ENST00000423595 505 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 AL591419.1-201ENST00000427423 339 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.48□□□□□ -1.85
UBQLN3Q9H347 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.48□□□□□ -1.85
UBQLN3Q9H347 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.48□□□□□ -1.85
UBQLN3Q9H347 USP9YP35-201ENST00000435696 412 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.48□□□□□ -1.85
UBQLN3Q9H347 SKP1P1-201ENST00000438081 489 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.48□□□□□ -1.85
UBQLN3Q9H347 RPL7P52-201ENST00000449200 742 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 SNORA84-201ENST00000459229 133 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 U8.18-201ENST00000459285 133 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 AC021146.8-201ENST00000507455 733 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 AC034244.1-201ENST00000507687 207 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 RNA5SP164-201ENST00000516533 110 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.48□□□□□ -1.85
UBQLN3Q9H347 AC023632.4-201ENST00000517783 191 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 AC022861.1-201ENST00000522981 663 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
UBQLN3Q9H347 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.48□□□□□ -1.85
UBQLN3Q9H347 EEF1B2P4-201ENST00000551398 348 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 AC126177.3-201ENST00000551839 688 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.48□□□□□ -1.85
UBQLN3Q9H347 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.48□□□□□ -1.85
UBQLN3Q9H347 AC009097.3-201ENST00000563557 1018 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.48□□□□□ -1.85
UBQLN3Q9H347 AC099489.2-201ENST00000574976 260 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 SNORD84-203ENST00000584275 78 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 AC022022.2-201ENST00000602989 360 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 XIAPP1-201ENST00000603162 600 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 AL137849.1-201ENST00000604767 169 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 AC025588.2-201ENST00000604851 466 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 AC245389.1-201ENST00000605141 529 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 AC011816.2-201ENST00000607089 556 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 AC025588.4-201ENST00000615802 908 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 AC004009.2-201ENST00000623016 728 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.48□□□□□ -1.85
UBQLN3Q9H347 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC3.48□□□□□ -1.85
UBQLN3Q9H347 CR381670.1-201ENST00000624291 1693 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
UBQLN3Q9H347 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.48□□□□□ -1.85
UBQLN3Q9H347 AC244517.1-201ENST00000606030 2086 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.48□□□□□ -1.85
UBQLN3Q9H347 AL079343.1-201ENST00000572358 1771 ntBASIC3.48□□□□□ -1.85
UBQLN3Q9H347 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
UBQLN3Q9H347 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
UBQLN3Q9H347 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms