Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 PRDX3P3-201ENST00000447765 522 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 RPL23AP31-201ENST00000456160 467 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 AC010401.1-201ENST00000463867 348 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 AC087312.1-201ENST00000471411 480 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 HMGN2P13-201ENST00000476476 274 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 RPL7P38-201ENST00000488396 739 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 AC096751.1-202ENST00000502691 1067 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 WBP1LP4-201ENST00000505043 344 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 AP001636.2-201ENST00000525517 696 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 AC008127.2-201ENST00000549925 1075 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 EEF1B2P4-201ENST00000551398 348 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 SULT1C2P1-202ENST00000562418 459 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 RPAP2P1-201ENST00000603626 1168 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 ELOCP35-201ENST00000604289 336 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 AP003973.1-201ENST00000604639 691 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 AL365503.1-201ENST00000605247 905 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 AC073657.2-201ENST00000605661 303 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 AC008962.1-201ENST00000605729 304 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 uc_338.1-201ENST00000612113 180 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 MIR7975-201ENST00000619350 68 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 AC012314.7-201ENST00000619693 93 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 GDI2P1-201ENST00000429312 1336 ntBASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
POLR1EQ9GZS1 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 SNORA63.3-201ENST00000362682 132 ntBASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 SNORA51.6-201ENST00000384151 125 ntBASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 RNU1-101P-201ENST00000391171 127 ntBASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 AL354719.1-201ENST00000406535 843 ntBASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 AC093578.1-201ENST00000415219 368 ntBASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 TRIAP1P1-201ENST00000427062 225 ntBASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 MTCO1P48-201ENST00000448024 1096 ntBASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 AC006539.3-201ENST00000454258 129 ntBASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 GAPDHP39-201ENST00000481866 979 ntBASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 AC006390.1-201ENST00000508068 283 ntBASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 MTND4LP22-201ENST00000508209 276 ntBASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 NDUFB9P3-201ENST00000521269 501 ntBASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 AP001317.1-201ENST00000531194 960 ntBASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 AC011602.1-201ENST00000546484 331 ntBASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 CYB5AP5-201ENST00000549779 389 ntBASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 AL391156.1-201ENST00000554965 554 ntBASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 AP000238.1-201ENST00000608759 426 ntBASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 AC008083.4-201ENST00000615076 444 ntBASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 AC084757.4-201ENST00000616350 526 ntBASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 AC018816.2-201ENST00000621460 353 ntBASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
POLR1EQ9GZS1 SRP72P2-201ENST00000344851 1979 ntBASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 RNU1-70P-201ENST00000362618 164 ntBASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 RNA5SP72-201ENST00000364442 117 ntBASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 RNU6-207P-201ENST00000384137 107 ntBASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 U3.29-201ENST00000391296 212 ntBASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 TAF9BP1-201ENST00000396646 746 ntBASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 SNORA11-201ENST00000408789 128 ntBASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 RNU6-575P-201ENST00000411326 105 ntBASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 HMGN1P24-201ENST00000412282 298 ntBASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 AC079780.1-201ENST00000428259 207 ntBASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 SNRPEP4-201ENST00000435815 279 ntBASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 CST9LP2-201ENST00000437612 320 ntBASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 AC000041.1-201ENST00000439655 175 ntBASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 AL358232.1-201ENST00000448030 501 ntBASIC3.34□□□□□ -1.87
POLR1EQ9GZS1 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 278.8 ms