Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AL359385.1-201ENST00000456509 365 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AP1S2P1-201ENST00000457344 379 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 RPS23P7-201ENST00000466210 444 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AC022034.3-201ENST00000471393 478 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AC012158.1-204ENST00000483430 465 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 RNA5SP360-201ENST00000516555 118 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AC022882.1-201ENST00000532142 501 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AK6P1-201ENST00000540219 478 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AC123904.2-201ENST00000548059 300 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AL157687.1-201ENST00000554853 619 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AC009101.1-201ENST00000568135 242 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AC099489.2-201ENST00000574976 260 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AC012417.1-201ENST00000582307 1039 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AC091135.1-201ENST00000585943 307 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AC011477.5-201ENST00000586571 259 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AC008277.2-201ENST00000605196 797 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AC011816.2-201ENST00000607089 556 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AC015813.4-201ENST00000610469 179 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 BX664608.1-201ENST00000610519 487 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AL133173.2-201ENST00000614270 90 ntBASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.31□□□□□ -1.72
AMBRA1Q9C0C7 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 RNU6-181P-201ENST00000363225 107 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 RNU1-130P-201ENST00000363930 160 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 Y_RNA.409-201ENST00000383990 98 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 RNU6-780P-201ENST00000391030 104 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 RPL23AP32-201ENST00000395315 459 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 AL121834.1-202ENST00000404494 277 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 RN7SKP27-201ENST00000410684 333 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 MTND3P17-201ENST00000416968 344 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 RPL12P34-201ENST00000424532 479 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 ELOCP14-201ENST00000428070 331 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 OR2B7P-201ENST00000429302 934 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 MTCO2P11-201ENST00000431069 680 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 ELOCP7-201ENST00000439968 331 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 GEMIN8P3-201ENST00000445417 720 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 MTND3P10-201ENST00000450967 341 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 MTND2P24-201ENST00000453434 806 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 AURKAPS2-201ENST00000454983 333 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 AC025164.1-201ENST00000496249 478 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 RNU6-445P-201ENST00000516949 107 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 AC008694.2-201ENST00000517591 306 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 IGKV1-32-201ENST00000519290 311 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 MEG8-218ENST00000556720 456 ntTSL 3 BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 AL365503.1-201ENST00000605247 905 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 AL391358.1-201ENST00000605342 190 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 AC121334.2-201ENST00000605387 271 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 AC017083.3-201ENST00000609955 700 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 DUXAP9-208ENST00000622815 614 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 AC015908.5-201ENST00000623289 343 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 LRRC77P-213ENST00000637727 880 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 AL442639.1-201ENST00000625030 1899 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 AC090971.4-201ENST00000560291 1800 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 AC105074.1-201ENST00000623380 3095 ntBASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
AMBRA1Q9C0C7 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 AC093535.2-201ENST00000624769 2326 ntBASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
AMBRA1Q9C0C7 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 114.7 ms