Protein–RNA interactions for Protein: Q9BRZ2

TRIM56, E3 ubiquitin-protein ligase TRIM56, humanhuman

Known RBP Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56Q9BRZ2 MIR3176-201ENST00000582210 90 ntBASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 uc_338.22-201ENST00000622722 187 ntBASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 AC007823.1-201ENST00000569932 1566 ntBASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM56Q9BRZ2 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AC011155.1-201ENST00000316512 456 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 RNU6-1029P-201ENST00000384109 107 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 RNU6-574P-201ENST00000384265 107 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 RNU6-907P-201ENST00000390924 102 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 RN7SKP158-201ENST00000410453 326 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AL139396.1-201ENST00000421137 167 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 RPL36AP6-201ENST00000435770 321 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 CYCSP12-201ENST00000437729 300 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AC064862.4-201ENST00000442180 334 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AP000281.1-201ENST00000444036 316 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 EEF1B2P6-201ENST00000445713 673 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 EIF4A1P11-201ENST00000451239 222 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 SNRPFP3-201ENST00000457792 225 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 RNU7-180P-201ENST00000459240 63 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 RNU6-1208P-201ENST00000459588 107 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 RPL35AP28-201ENST00000459730 331 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 RN7SL72P-201ENST00000460697 269 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 HMGB1P21-201ENST00000502313 581 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AC092436.1-201ENST00000506450 503 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 SMURF2P1-201ENST00000514992 481 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AC022790.1-201ENST00000522872 204 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 MTND4P7-201ENST00000523876 130 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AC103843.2-201ENST00000530523 682 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AP000857.1-201ENST00000532151 543 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AC009852.2-201ENST00000567898 485 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AC010547.6-201ENST00000571789 193 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 MIR4703-201ENST00000577728 79 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AL031666.3-201ENST00000609320 1006 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AC092807.2-201ENST00000609367 243 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AL512624.1-201ENST00000613638 469 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AC022467.1-201ENST00000614738 749 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 uc_338.34-201ENST00000617467 174 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AC073869.8-201ENST00000641806 335 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 MTND5P10-201ENST00000603719 1809 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 AL359922.3-201ENST00000624779 1670 ntBASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.52□□□□□ -1.53
TRIM56Q9BRZ2 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 STX3-208ENST00000641815 3236 ntBASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 AC008079.2-201ENST00000623543 20396 ntBASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 Y_RNA.31-201ENST00000362574 102 ntBASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 RNU6-331P-201ENST00000384724 107 ntBASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
TRIM56Q9BRZ2 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms