Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AL132838.2-201ENST00000492041 314 ntBASIC3.34□□□□□ -1.87
SSX3Q99909 AC090453.1-201ENST00000495560 436 ntBASIC3.34□□□□□ -1.87
SSX3Q99909 AC091951.3-201ENST00000504093 246 ntBASIC3.34□□□□□ -1.87
SSX3Q99909 BTF3L4P4-201ENST00000506381 449 ntBASIC3.34□□□□□ -1.87
SSX3Q99909 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.34□□□□□ -1.87
SSX3Q99909 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.34□□□□□ -1.87
SSX3Q99909 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.34□□□□□ -1.87
SSX3Q99909 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.34□□□□□ -1.87
SSX3Q99909 PHBP14-201ENST00000512887 367 ntBASIC3.34□□□□□ -1.87
SSX3Q99909 AC026402.1-201ENST00000513642 170 ntBASIC3.34□□□□□ -1.87
SSX3Q99909 RNU6-1095P-201ENST00000516148 108 ntBASIC3.34□□□□□ -1.87
SSX3Q99909 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.34□□□□□ -1.87
SSX3Q99909 HSPA8P13-201ENST00000523715 472 ntBASIC3.34□□□□□ -1.87
SSX3Q99909 AC022690.1-201ENST00000526681 550 ntBASIC3.34□□□□□ -1.87
SSX3Q99909 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
SSX3Q99909 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
SSX3Q99909 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SSX3Q99909 AC018630.1-201ENST00000541376 925 ntBASIC3.34□□□□□ -1.87
SSX3Q99909 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.34□□□□□ -1.87
SSX3Q99909 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC3.34□□□□□ -1.87
SSX3Q99909 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.34□□□□□ -1.87
SSX3Q99909 MTCO3P24-201ENST00000572729 782 ntBASIC3.34□□□□□ -1.87
SSX3Q99909 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.34□□□□□ -1.87
SSX3Q99909 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SSX3Q99909 MIR4760-201ENST00000585040 80 ntBASIC3.34□□□□□ -1.87
SSX3Q99909 AL451044.1-201ENST00000604867 238 ntBASIC3.34□□□□□ -1.87
SSX3Q99909 AC106900.2-201ENST00000604994 317 ntBASIC3.34□□□□□ -1.87
SSX3Q99909 AC025588.4-201ENST00000615802 908 ntBASIC3.34□□□□□ -1.87
SSX3Q99909 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.34□□□□□ -1.87
SSX3Q99909 AL353748.2-201ENST00000622148 471 ntBASIC3.34□□□□□ -1.87
SSX3Q99909 OR5BE1P-202ENST00000641168 1176 ntBASIC3.34□□□□□ -1.87
SSX3Q99909 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SSX3Q99909 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SSX3Q99909 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.34□□□□□ -1.88
SSX3Q99909 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
SSX3Q99909 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SSX3Q99909 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SSX3Q99909 RLIMP1-201ENST00000339626 1680 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.33□□□□□ -1.88
SSX3Q99909 AL079343.1-201ENST00000572358 1771 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
SSX3Q99909 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SSX3Q99909 AC116667.1-201ENST00000604855 2072 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SSX3Q99909 MIR372-201ENST00000362225 67 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 RNA5SP283-201ENST00000365604 119 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 SNORD51-201ENST00000384320 80 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SSX3Q99909 HMGN2P8-201ENST00000391458 268 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 AL590704.1-201ENST00000402856 794 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.33□□□□□ -1.88
SSX3Q99909 RN7SKP285-201ENST00000410137 318 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.33□□□□□ -1.88
SSX3Q99909 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.33□□□□□ -1.88
SSX3Q99909 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.33□□□□□ -1.88
SSX3Q99909 AL117339.2-201ENST00000430475 180 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.33□□□□□ -1.88
SSX3Q99909 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.33□□□□□ -1.88
SSX3Q99909 AP002512.3-201ENST00000440231 985 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SSX3Q99909 FGF7P5-201ENST00000441829 291 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 AC005297.2-201ENST00000450430 606 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.33□□□□□ -1.88
SSX3Q99909 MTCO3P16-201ENST00000454456 754 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 MTCO3P11-201ENST00000455103 774 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 SUMO2P2-201ENST00000456482 255 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.33□□□□□ -1.88
SSX3Q99909 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.33□□□□□ -1.88
SSX3Q99909 RPL7P9-201ENST00000468715 747 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SSX3Q99909 AC108729.1-201ENST00000487812 947 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 CBX3P3-201ENST00000508108 532 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 AC010587.2-201ENST00000511727 448 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.33□□□□□ -1.88
SSX3Q99909 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.33□□□□□ -1.88
SSX3Q99909 AC063950.1-201ENST00000552036 308 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 MIR4286-201ENST00000580651 93 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.33□□□□□ -1.88
SSX3Q99909 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.33□□□□□ -1.88
SSX3Q99909 AC006270.3-201ENST00000605967 1036 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 AC106028.5-201ENST00000610332 395 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
SSX3Q99909 AC004009.2-201ENST00000623016 728 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.33□□□□□ -1.88
SSX3Q99909 AC006927.4-201ENST00000639187 543 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SSX3Q99909 AC005539.1-201ENST00000443768 1479 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.33□□□□□ -1.88
SSX3Q99909 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SSX3Q99909 ZNF807-201ENST00000328088 1707 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 MTND5P24-201ENST00000438892 1767 ntBASIC3.33□□□□□ -1.88
SSX3Q99909 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.32□□□□□ -1.88
SSX3Q99909 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
SSX3Q99909 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.32□□□□□ -1.88
SSX3Q99909 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
SSX3Q99909 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SSX3Q99909 RNU1-18P-201ENST00000363062 164 ntBASIC3.32□□□□□ -1.88
SSX3Q99909 Y_RNA.126-201ENST00000363382 111 ntBASIC3.32□□□□□ -1.88
SSX3Q99909 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SSX3Q99909 RNU1-101P-201ENST00000391171 127 ntBASIC3.32□□□□□ -1.88
SSX3Q99909 DHFRP6-201ENST00000401776 268 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms