Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 MTATP6P11-201ENST00000428071 670 ntBASIC3.1□□□□□ -1.91
ABCA3Q99758 AL353597.2-202ENST00000434901 373 ntBASIC3.1□□□□□ -1.91
ABCA3Q99758 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.1□□□□□ -1.91
ABCA3Q99758 USP9YP7-201ENST00000436723 430 ntBASIC3.1□□□□□ -1.91
ABCA3Q99758 USP9YP32-201ENST00000452432 430 ntBASIC3.1□□□□□ -1.91
ABCA3Q99758 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.1□□□□□ -1.91
ABCA3Q99758 AC116337.1-201ENST00000509680 687 ntBASIC3.1□□□□□ -1.91
ABCA3Q99758 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.1□□□□□ -1.91
ABCA3Q99758 OR7K1P-201ENST00000546439 926 ntBASIC3.1□□□□□ -1.91
ABCA3Q99758 AC055876.1-202ENST00000567053 138 ntBASIC3.1□□□□□ -1.91
ABCA3Q99758 AC135628.1-201ENST00000568867 534 ntBASIC3.1□□□□□ -1.91
ABCA3Q99758 MIR5007-201ENST00000583098 95 ntBASIC3.1□□□□□ -1.91
ABCA3Q99758 VN1R9P-201ENST00000614184 867 ntBASIC3.1□□□□□ -1.91
ABCA3Q99758 AC107021.2-201ENST00000567714 2095 ntBASIC3.09□□□□□ -1.91
ABCA3Q99758 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.09□□□□□ -1.91
ABCA3Q99758 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.09□□□□□ -1.91
ABCA3Q99758 AC243772.1-201ENST00000451620 410 ntBASIC3.09□□□□□ -1.91
ABCA3Q99758 MTCYBP28-201ENST00000566728 1132 ntBASIC3.09□□□□□ -1.91
ABCA3Q99758 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.09□□□□□ -1.91
ABCA3Q99758 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
ABCA3Q99758 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.09□□□□□ -1.92
ABCA3Q99758 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
ABCA3Q99758 RNU1-91P-201ENST00000364746 163 ntBASIC3.08□□□□□ -1.92
ABCA3Q99758 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
ABCA3Q99758 AL591416.1-201ENST00000404015 867 ntBASIC3.08□□□□□ -1.92
ABCA3Q99758 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.08□□□□□ -1.92
ABCA3Q99758 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.08□□□□□ -1.92
ABCA3Q99758 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.08□□□□□ -1.92
ABCA3Q99758 AC098583.1-201ENST00000480875 255 ntBASIC3.08□□□□□ -1.92
ABCA3Q99758 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.08□□□□□ -1.92
ABCA3Q99758 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC3.08□□□□□ -1.92
ABCA3Q99758 AC123904.3-201ENST00000547218 814 ntBASIC3.08□□□□□ -1.92
ABCA3Q99758 AL389895.1-201ENST00000554127 252 ntBASIC3.08□□□□□ -1.92
ABCA3Q99758 OR4H12P-201ENST00000556269 907 ntBASIC3.08□□□□□ -1.92
ABCA3Q99758 AC023813.4-201ENST00000607580 580 ntBASIC3.08□□□□□ -1.92
ABCA3Q99758 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
ABCA3Q99758 AP006248.2-201ENST00000623309 592 ntBASIC3.08□□□□□ -1.92
ABCA3Q99758 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.08□□□□□ -1.92
ABCA3Q99758 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.08□□□□□ -1.92
ABCA3Q99758 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.08□□□□□ -1.92
ABCA3Q99758 AL512646.1-201ENST00000269395 1077 ntBASIC3.07□□□□□ -1.92
ABCA3Q99758 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.07□□□□□ -1.92
ABCA3Q99758 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC3.07□□□□□ -1.92
ABCA3Q99758 SNORA41-201ENST00000384675 132 ntBASIC3.07□□□□□ -1.92
ABCA3Q99758 AIMP1P1-201ENST00000418670 937 ntBASIC3.07□□□□□ -1.92
ABCA3Q99758 AC087385.1-201ENST00000475062 312 ntBASIC3.07□□□□□ -1.92
ABCA3Q99758 AC011037.1-201ENST00000483964 558 ntBASIC3.07□□□□□ -1.92
ABCA3Q99758 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.07□□□□□ -1.92
ABCA3Q99758 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ABCA3Q99758 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.07□□□□□ -1.92
ABCA3Q99758 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.07□□□□□ -1.92
ABCA3Q99758 OR4K7P-201ENST00000580232 945 ntBASIC3.07□□□□□ -1.92
ABCA3Q99758 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC3.07□□□□□ -1.92
ABCA3Q99758 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
ABCA3Q99758 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
ABCA3Q99758 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
ABCA3Q99758 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ABCA3Q99758 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
ABCA3Q99758 HMGB1P11-201ENST00000413899 637 ntBASIC3.07□□□□□ -1.92
ABCA3Q99758 MTCO2P17-201ENST00000424336 677 ntBASIC3.07□□□□□ -1.92
ABCA3Q99758 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.07□□□□□ -1.92
ABCA3Q99758 AC093331.1-201ENST00000521474 169 ntBASIC3.07□□□□□ -1.92
ABCA3Q99758 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ABCA3Q99758 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.07□□□□□ -1.92
ABCA3Q99758 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.07□□□□□ -1.92
ABCA3Q99758 AC009570.1-201ENST00000609599 745 ntBASIC3.07□□□□□ -1.92
ABCA3Q99758 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC3.06□□□□□ -1.92
ABCA3Q99758 MTND5P28-201ENST00000438005 1594 ntBASIC3.06□□□□□ -1.92
ABCA3Q99758 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ABCA3Q99758 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ABCA3Q99758 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.06□□□□□ -1.92
ABCA3Q99758 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.06□□□□□ -1.92
ABCA3Q99758 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
ABCA3Q99758 MIR7-2-201ENST00000384970 110 ntBASIC3.06□□□□□ -1.92
ABCA3Q99758 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.06□□□□□ -1.92
ABCA3Q99758 RPS15AP6-201ENST00000420703 385 ntBASIC3.06□□□□□ -1.92
ABCA3Q99758 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.06□□□□□ -1.92
ABCA3Q99758 MTCYBP14-201ENST00000457471 715 ntBASIC3.06□□□□□ -1.92
ABCA3Q99758 RPL23AP42-201ENST00000471152 471 ntBASIC3.06□□□□□ -1.92
ABCA3Q99758 MIR4781-201ENST00000585250 76 ntBASIC3.06□□□□□ -1.92
ABCA3Q99758 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.06□□□□□ -1.92
ABCA3Q99758 AC067747.1-201ENST00000608026 250 ntBASIC3.06□□□□□ -1.92
ABCA3Q99758 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.06□□□□□ -1.92
ABCA3Q99758 AC090229.1-201ENST00000590983 1609 ntBASIC3.06□□□□□ -1.92
ABCA3Q99758 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
ABCA3Q99758 RNU2-2P-201ENST00000410396 191 ntBASIC3.05□□□□□ -1.92
ABCA3Q99758 RNU6-321P-201ENST00000410912 106 ntBASIC3.05□□□□□ -1.92
ABCA3Q99758 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC3.05□□□□□ -1.92
ABCA3Q99758 SNRPGP18-201ENST00000553000 214 ntBASIC3.05□□□□□ -1.92
ABCA3Q99758 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC3.05□□□□□ -1.92
ABCA3Q99758 AC103710.1-201ENST00000610003 901 ntBASIC3.05□□□□□ -1.92
ABCA3Q99758 U2.15-201ENST00000611544 191 ntBASIC3.05□□□□□ -1.92
ABCA3Q99758 U2.16-201ENST00000613119 191 ntBASIC3.05□□□□□ -1.92
ABCA3Q99758 U2.12-201ENST00000613778 191 ntBASIC3.05□□□□□ -1.92
ABCA3Q99758 U2.20-201ENST00000613956 192 ntBASIC3.05□□□□□ -1.92
ABCA3Q99758 U2.9-201ENST00000615427 191 ntBASIC3.05□□□□□ -1.92
ABCA3Q99758 U2.11-201ENST00000616345 191 ntBASIC3.05□□□□□ -1.92
ABCA3Q99758 U2.2-201ENST00000616535 191 ntBASIC3.05□□□□□ -1.92
ABCA3Q99758 U2.3-201ENST00000617785 191 ntBASIC3.05□□□□□ -1.92
ABCA3Q99758 U2.19-201ENST00000618602 191 ntBASIC3.05□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms