Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC100870.1-201ENST00000522035 505 ntBASIC1.98□□□□□ -2.09
COL12A1Q99715 ARL2BPP2-201ENST00000550907 489 ntBASIC1.98□□□□□ -2.09
COL12A1Q99715 BX248123.2-201ENST00000606318 124 ntBASIC1.98□□□□□ -2.09
COL12A1Q99715 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
COL12A1Q99715 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
COL12A1Q99715 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.97□□□□□ -2.09
COL12A1Q99715 AL512633.1-201ENST00000399931 655 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 NDUFB4P6-201ENST00000436819 366 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 LTV1P1-201ENST00000510683 1237 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC1.97□□□□□ -2.09
COL12A1Q99715 AP000857.1-201ENST00000532151 543 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.97□□□□□ -2.09
COL12A1Q99715 AC078899.5-201ENST00000612475 178 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
COL12A1Q99715 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
COL12A1Q99715 RNA5SP190-201ENST00000365222 118 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 RNU6-1-201ENST00000383898 107 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 RNU6-42P-201ENST00000384165 107 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 RNU6-36P-201ENST00000384172 107 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 RNU6-4P-201ENST00000384205 107 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 RNU6-5P-201ENST00000384238 107 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 RNU6-3P-201ENST00000384314 107 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 RNU6-2-201ENST00000384627 107 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 RNU6-9-201ENST00000384776 107 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 RNU6-33P-201ENST00000384793 107 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 MIR221-201ENST00000385135 110 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 RPS7P9-201ENST00000414704 586 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 HMGB3P23-201ENST00000414981 585 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 TRIM60P8Y-201ENST00000436338 762 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC1.97□□□□□ -2.09
COL12A1Q99715 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC1.97□□□□□ -2.09
COL12A1Q99715 IGLVIV-53-201ENST00000520107 367 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC1.97□□□□□ -2.09
COL12A1Q99715 RNU6-6P-201ENST00000606623 107 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 Z99129.2-201ENST00000619967 314 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 GMFB-210ENST00000628554 639 ntTSL 4 BASIC1.97□□□□□ -2.09
COL12A1Q99715 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
COL12A1Q99715 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC1.97□□□□□ -2.09
COL12A1Q99715 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
COL12A1Q99715 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC1.97□□□□□ -2.09
COL12A1Q99715 RPS15AP12-201ENST00000419498 388 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 AC098826.1-201ENST00000433943 471 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 FABP5P13-201ENST00000452144 328 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC1.97□□□□□ -2.09
COL12A1Q99715 AC233279.1-201ENST00000455300 423 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 CREM-226ENST00000469949 721 ntTSL 3 BASIC1.97□□□□□ -2.09
COL12A1Q99715 RPS29P11-201ENST00000496507 171 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 AC021146.5-201ENST00000503544 545 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 AC119751.1-201ENST00000513357 765 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 RNA5SP220-201ENST00000516298 104 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC1.97□□□□□ -2.09
COL12A1Q99715 AC005046.1-201ENST00000608515 625 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 AL391813.2-201ENST00000609113 322 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.97□□□□□ -2.09
COL12A1Q99715 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 AC022960.2-201ENST00000616300 666 ntBASIC1.97□□□□□ -2.09
COL12A1Q99715 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC1.96□□□□□ -2.1
COL12A1Q99715 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
COL12A1Q99715 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC1.96□□□□□ -2.1
COL12A1Q99715 AL158825.1-201ENST00000414735 521 ntBASIC1.96□□□□□ -2.1
COL12A1Q99715 AC013410.1-201ENST00000436223 1232 ntBASIC1.96□□□□□ -2.1
COL12A1Q99715 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC1.96□□□□□ -2.1
COL12A1Q99715 AC133473.1-201ENST00000455173 299 ntBASIC1.96□□□□□ -2.1
COL12A1Q99715 AL121594.1-201ENST00000475906 575 ntBASIC1.96□□□□□ -2.1
COL12A1Q99715 snoZ278.1-201ENST00000517059 112 ntBASIC1.96□□□□□ -2.1
COL12A1Q99715 AC135279.1-201ENST00000543493 504 ntBASIC1.96□□□□□ -2.1
COL12A1Q99715 MIR6504-201ENST00000613520 61 ntBASIC1.96□□□□□ -2.1
COL12A1Q99715 RMST_2.1-201ENST00000617263 136 ntBASIC1.96□□□□□ -2.1
COL12A1Q99715 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
COL12A1Q99715 AC105402.2-201ENST00000438503 358 ntBASIC1.96□□□□□ -2.1
COL12A1Q99715 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC1.96□□□□□ -2.1
COL12A1Q99715 RPL21P41-201ENST00000459863 264 ntBASIC1.96□□□□□ -2.1
COL12A1Q99715 RPS15AP17-201ENST00000470598 390 ntBASIC1.96□□□□□ -2.1
COL12A1Q99715 AC103975.1-201ENST00000482506 483 ntBASIC1.96□□□□□ -2.1
COL12A1Q99715 AC090543.1-201ENST00000492168 485 ntBASIC1.96□□□□□ -2.1
COL12A1Q99715 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC1.96□□□□□ -2.1
COL12A1Q99715 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.96□□□□□ -2.1
COL12A1Q99715 MIR5092-201ENST00000583139 88 ntBASIC1.96□□□□□ -2.1
COL12A1Q99715 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC1.96□□□□□ -2.1
COL12A1Q99715 SAGE4P-201ENST00000442271 3381 ntBASIC1.95□□□□□ -2.1
COL12A1Q99715 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
COL12A1Q99715 Y_RNA.205-201ENST00000364128 113 ntBASIC1.95□□□□□ -2.1
COL12A1Q99715 RPL23AP48-201ENST00000406913 488 ntBASIC1.95□□□□□ -2.1
COL12A1Q99715 MRPL50P4-201ENST00000446432 475 ntBASIC1.95□□□□□ -2.1
COL12A1Q99715 AC017007.3-201ENST00000479865 435 ntBASIC1.95□□□□□ -2.1
COL12A1Q99715 AC011037.1-201ENST00000483964 558 ntBASIC1.95□□□□□ -2.1
COL12A1Q99715 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC1.95□□□□□ -2.1
COL12A1Q99715 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.95□□□□□ -2.1
COL12A1Q99715 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
COL12A1Q99715 IGLV3-17-201ENST00000519099 244 ntBASIC1.95□□□□□ -2.1
COL12A1Q99715 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC1.95□□□□□ -2.1
COL12A1Q99715 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
COL12A1Q99715 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
COL12A1Q99715 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
COL12A1Q99715 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
COL12A1Q99715 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
COL12A1Q99715 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
COL12A1Q99715 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC1.95□□□□□ -2.1
COL12A1Q99715 AL590004.2-201ENST00000404787 371 ntBASIC1.95□□□□□ -2.1
COL12A1Q99715 FAT1P1-201ENST00000406588 507 ntBASIC1.95□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms