Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.03□□□□□ -1.92
CDX2Q99626 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.03□□□□□ -1.92
CDX2Q99626 ELOCP11-201ENST00000436690 332 ntBASIC3.03□□□□□ -1.92
CDX2Q99626 ELOCP16-201ENST00000444494 332 ntBASIC3.03□□□□□ -1.92
CDX2Q99626 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC3.03□□□□□ -1.92
CDX2Q99626 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.03□□□□□ -1.92
CDX2Q99626 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.03□□□□□ -1.92
CDX2Q99626 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.03□□□□□ -1.92
CDX2Q99626 AC104689.1-201ENST00000473356 768 ntBASIC3.03□□□□□ -1.92
CDX2Q99626 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC3.03□□□□□ -1.92
CDX2Q99626 FCF1P3-201ENST00000496394 590 ntBASIC3.03□□□□□ -1.92
CDX2Q99626 CKS1BP2-201ENST00000497342 240 ntBASIC3.03□□□□□ -1.92
CDX2Q99626 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.03□□□□□ -1.92
CDX2Q99626 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.03□□□□□ -1.92
CDX2Q99626 RN7SKP282-201ENST00000516824 299 ntBASIC3.03□□□□□ -1.92
CDX2Q99626 AC008562.1-201ENST00000521763 330 ntBASIC3.03□□□□□ -1.92
CDX2Q99626 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.03□□□□□ -1.92
CDX2Q99626 OR5AK3P-201ENST00000527486 1297 ntBASIC3.03□□□□□ -1.92
CDX2Q99626 OR5D17P-201ENST00000531492 978 ntBASIC3.03□□□□□ -1.92
CDX2Q99626 TAS2R43-201ENST00000531678 1027 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CDX2Q99626 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CDX2Q99626 MIR3186-201ENST00000577404 85 ntBASIC3.03□□□□□ -1.92
CDX2Q99626 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.03□□□□□ -1.92
CDX2Q99626 PCNAP1-202ENST00000595299 752 ntBASIC3.03□□□□□ -1.92
CDX2Q99626 AC069304.3-201ENST00000603938 1084 ntBASIC3.03□□□□□ -1.92
CDX2Q99626 AC018618.2-201ENST00000604770 446 ntBASIC3.03□□□□□ -1.92
CDX2Q99626 AC016727.1-205ENST00000605437 569 ntBASIC3.03□□□□□ -1.92
CDX2Q99626 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.03□□□□□ -1.92
CDX2Q99626 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC3.03□□□□□ -1.92
CDX2Q99626 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.03□□□□□ -1.92
CDX2Q99626 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CDX2Q99626 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC3.03□□□□□ -1.92
CDX2Q99626 AC007318.2-201ENST00000620999 243 ntBASIC3.03□□□□□ -1.92
CDX2Q99626 AL589740.1-205ENST00000635561 565 ntTSL 5 BASIC3.03□□□□□ -1.92
CDX2Q99626 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.03□□□□□ -1.93
CDX2Q99626 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC3.03□□□□□ -1.93
CDX2Q99626 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
CDX2Q99626 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CDX2Q99626 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDX2Q99626 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CDX2Q99626 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.02□□□□□ -1.93
CDX2Q99626 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CDX2Q99626 RNU6-543P-201ENST00000362576 108 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 MIR153-1-201ENST00000384914 90 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 MTATP6P31-201ENST00000406985 692 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.02□□□□□ -1.93
CDX2Q99626 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.02□□□□□ -1.93
CDX2Q99626 AC002075.2-201ENST00000425207 252 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 FO393419.3-201ENST00000428741 282 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 HMGN2P3-201ENST00000433603 273 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 HMGN2P5-201ENST00000436882 273 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 AL691517.1-201ENST00000440833 1235 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 AL513321.1-201ENST00000441175 761 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.02□□□□□ -1.93
CDX2Q99626 RPL23AP15-201ENST00000450202 459 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 RPL12P26-201ENST00000452430 487 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC3.02□□□□□ -1.93
CDX2Q99626 AC096992.1-201ENST00000459808 709 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.02□□□□□ -1.93
CDX2Q99626 RPL21P99-201ENST00000480369 423 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 AC090071.1-201ENST00000507713 644 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.02□□□□□ -1.93
CDX2Q99626 RPL7P20-201ENST00000520308 745 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.02□□□□□ -1.93
CDX2Q99626 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.02□□□□□ -1.93
CDX2Q99626 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.02□□□□□ -1.93
CDX2Q99626 PTP4A1P6-201ENST00000531034 478 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 AC025260.1-201ENST00000548858 430 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 POLR2KP1-201ENST00000553226 168 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 AL389895.1-201ENST00000554127 252 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.02□□□□□ -1.93
CDX2Q99626 AC018754.1-201ENST00000607486 925 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.02□□□□□ -1.93
CDX2Q99626 AL118556.2-201ENST00000614375 824 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 AL354696.1-201ENST00000614652 497 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 AC121761.2-201ENST00000617300 689 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 AF117829.1-206ENST00000621883 3802 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 AC083865.1-201ENST00000636634 831 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 U6.107-201ENST00000637108 79 ntBASIC3.02□□□□□ -1.93
CDX2Q99626 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDX2Q99626 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.02□□□□□ -1.93
CDX2Q99626 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDX2Q99626 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDX2Q99626 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
CDX2Q99626 SAGE4P-201ENST00000442271 3381 ntBASIC3.01□□□□□ -1.93
CDX2Q99626 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.01□□□□□ -1.93
CDX2Q99626 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CDX2Q99626 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CDX2Q99626 SNORA31-201ENST00000362607 130 ntBASIC3.01□□□□□ -1.93
CDX2Q99626 RNU2-21P-201ENST00000410368 188 ntBASIC3.01□□□□□ -1.93
CDX2Q99626 AC127526.1-201ENST00000417526 366 ntBASIC3.01□□□□□ -1.93
CDX2Q99626 PNRC2P1-201ENST00000423940 420 ntBASIC3.01□□□□□ -1.93
CDX2Q99626 FAM204CP-201ENST00000424489 642 ntBASIC3.01□□□□□ -1.93
CDX2Q99626 FAR1P1-201ENST00000427163 934 ntBASIC3.01□□□□□ -1.93
CDX2Q99626 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.01□□□□□ -1.93
CDX2Q99626 NEK4P1-201ENST00000433383 879 ntBASIC3.01□□□□□ -1.93
CDX2Q99626 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.01□□□□□ -1.93
CDX2Q99626 AL662791.1-201ENST00000441992 928 ntBASIC3.01□□□□□ -1.93
CDX2Q99626 TPTE2P6-202ENST00000445572 1007 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms