Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 KATNBL1P6-201ENST00000453433 915 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 HMGN2P7-201ENST00000456186 273 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 snoU13.3-201ENST00000459441 104 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.92□□□□□ -1.78
PKP4Q99569 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.92□□□□□ -1.78
PKP4Q99569 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC3.92□□□□□ -1.78
PKP4Q99569 CBX3P3-201ENST00000508108 532 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.92□□□□□ -1.78
PKP4Q99569 RNU2-58P-201ENST00000516403 183 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 RN7SKP116-201ENST00000516902 319 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 RNA5SP135-201ENST00000517019 125 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.92□□□□□ -1.78
PKP4Q99569 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.92□□□□□ -1.78
PKP4Q99569 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.92□□□□□ -1.78
PKP4Q99569 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PKP4Q99569 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.92□□□□□ -1.78
PKP4Q99569 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC3.92□□□□□ -1.78
PKP4Q99569 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.92□□□□□ -1.78
PKP4Q99569 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
PKP4Q99569 AC022968.1-201ENST00000567372 442 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 AC136624.4-201ENST00000573044 370 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PKP4Q99569 AC073648.5-201ENST00000603502 305 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 AL136363.2-201ENST00000604173 851 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 AC092354.1-201ENST00000606057 376 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 AL031775.1-201ENST00000607014 887 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 AL354760.1-201ENST00000608357 643 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 AC012531.5-201ENST00000611375 151 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PKP4Q99569 AC073968.1-201ENST00000618594 637 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 AC112484.5-201ENST00000624189 228 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PKP4Q99569 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.92□□□□□ -1.78
PKP4Q99569 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.92□□□□□ -1.78
PKP4Q99569 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.92□□□□□ -1.78
PKP4Q99569 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
PKP4Q99569 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PKP4Q99569 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
PKP4Q99569 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.92□□□□□ -1.78
PKP4Q99569 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
PKP4Q99569 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PKP4Q99569 AC027514.1-201ENST00000588561 1603 ntBASIC3.92□□□□□ -1.78
PKP4Q99569 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.91□□□□□ -1.78
PKP4Q99569 USP8P1-201ENST00000494673 3183 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
PKP4Q99569 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
PKP4Q99569 SNORA3C-201ENST00000408792 125 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 RNA5SP317-201ENST00000410176 116 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 RNA5SP311-201ENST00000411290 116 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 UBE2V1P10-201ENST00000414685 269 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 ELOCP17-201ENST00000414751 326 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 AL391219.1-201ENST00000422570 483 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.91□□□□□ -1.78
PKP4Q99569 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC3.91□□□□□ -1.78
PKP4Q99569 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 NANOGP6-201ENST00000429190 847 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.91□□□□□ -1.78
PKP4Q99569 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.91□□□□□ -1.78
PKP4Q99569 RPL21P112-201ENST00000434403 463 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.91□□□□□ -1.78
PKP4Q99569 RPL21P133-201ENST00000443666 476 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.91□□□□□ -1.78
PKP4Q99569 RPL7P59-201ENST00000447700 943 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.91□□□□□ -1.78
PKP4Q99569 RPS11P1-201ENST00000451072 473 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.91□□□□□ -1.78
PKP4Q99569 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.91□□□□□ -1.78
PKP4Q99569 ANP32BP2-201ENST00000454525 545 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC3.91□□□□□ -1.78
PKP4Q99569 SRRM1P2-201ENST00000464531 1192 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 AC116337.2-201ENST00000477662 156 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 RN7SL271P-201ENST00000487601 295 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 SETP14-201ENST00000497538 873 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 AC004069.2-201ENST00000505438 1114 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 AC048346.1-201ENST00000510247 144 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 AC079140.3-201ENST00000511111 550 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 RNA5SP315-201ENST00000516340 116 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 RNA5SP312-201ENST00000517068 116 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.91□□□□□ -1.78
PKP4Q99569 ARL2BPP5-201ENST00000523141 481 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.91□□□□□ -1.78
PKP4Q99569 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.91□□□□□ -1.78
PKP4Q99569 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.91□□□□□ -1.78
PKP4Q99569 OR5D17P-201ENST00000531492 978 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 AP003385.6-201ENST00000531603 374 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.91□□□□□ -1.78
PKP4Q99569 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.91□□□□□ -1.78
PKP4Q99569 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.91□□□□□ -1.78
PKP4Q99569 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.91□□□□□ -1.78
PKP4Q99569 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.91□□□□□ -1.78
PKP4Q99569 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.91□□□□□ -1.78
PKP4Q99569 AC107954.1-201ENST00000565906 727 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.91□□□□□ -1.78
PKP4Q99569 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.91□□□□□ -1.78
PKP4Q99569 AC107982.3-201ENST00000584957 985 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 AC008507.1-201ENST00000587506 734 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.91□□□□□ -1.78
PKP4Q99569 VN1R92P-201ENST00000598511 928 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 AL355812.1-201ENST00000603215 216 ntBASIC3.91□□□□□ -1.78
PKP4Q99569 AL390816.3-201ENST00000604527 1066 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms