Protein–RNA interactions for Protein: Q96QK1

VPS35, Vacuolar protein sorting-associated protein 35, humanhuman

Predictions only

Length 796 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35Q96QK1 Z99755.1-201ENST00000414048 380 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 AC093578.1-201ENST00000415219 368 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.36□□□□□ -1.87
VPS35Q96QK1 USP9YP21-201ENST00000420603 432 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 AC012498.1-201ENST00000424037 437 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 TRIAP1P1-201ENST00000427062 225 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 AC097713.2-201ENST00000430199 356 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 NEK4P1-201ENST00000433383 879 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 AC008264.1-201ENST00000447612 367 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS35Q96QK1 RPS20P24-201ENST00000457473 361 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 AC008155.2-201ENST00000464337 397 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 RN7SL442P-201ENST00000473804 320 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 RPS4XP22-201ENST00000480755 780 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 MTCO3P35-201ENST00000485582 781 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 RPL21P13-201ENST00000488305 481 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 AC020893.1-201ENST00000502452 580 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC3.36□□□□□ -1.87
VPS35Q96QK1 WBP1LP4-201ENST00000505043 344 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS35Q96QK1 AC069306.1-201ENST00000507006 843 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VPS35Q96QK1 TXNP6-201ENST00000510190 310 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS35Q96QK1 AC006518.1-201ENST00000541449 943 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 AC008127.2-201ENST00000549925 1075 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 SYF2P1-201ENST00000550658 413 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 OR4T1P-201ENST00000554933 911 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 TGIF1P1-201ENST00000558095 802 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS35Q96QK1 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.36□□□□□ -1.87
VPS35Q96QK1 AC006116.7-201ENST00000590141 756 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 AL445435.1-201ENST00000604232 665 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 AC093673.2-201ENST00000609674 331 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 RNU6-1192P-201ENST00000612197 107 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 RNU6-489P-201ENST00000618289 107 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 PLCE1P1-201ENST00000622094 305 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 AP002371.2-201ENST00000624450 503 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS35Q96QK1 AC004925.1-201ENST00000624256 2706 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 MAPK10-362ENST00000641864 4484 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 AC010733.2-201ENST00000589496 5702 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
VPS35Q96QK1 NUP58P1-201ENST00000502546 1738 ntBASIC3.36□□□□□ -1.87
VPS35Q96QK1 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.36□□□□□ -1.87
VPS35Q96QK1 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
VPS35Q96QK1 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS35Q96QK1 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VPS35Q96QK1 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS35Q96QK1 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
VPS35Q96QK1 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VPS35Q96QK1 SUGT1P1-201ENST00000379514 476 ntBASIC3.35□□□□□ -1.87
VPS35Q96QK1 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS35Q96QK1 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
VPS35Q96QK1 RNU6-1300P-201ENST00000391046 108 ntBASIC3.35□□□□□ -1.87
VPS35Q96QK1 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
VPS35Q96QK1 AL079342.2-201ENST00000403367 482 ntBASIC3.35□□□□□ -1.87
VPS35Q96QK1 RNU2-28P-201ENST00000410457 189 ntBASIC3.35□□□□□ -1.87
VPS35Q96QK1 HSFY4P-201ENST00000415994 1181 ntBASIC3.35□□□□□ -1.87
VPS35Q96QK1 MTCO3P12-201ENST00000416718 547 ntBASIC3.35□□□□□ -1.87
VPS35Q96QK1 DPRXP1-201ENST00000426312 460 ntBASIC3.35□□□□□ -1.87
VPS35Q96QK1 RPL23AP69-201ENST00000431134 458 ntBASIC3.35□□□□□ -1.87
VPS35Q96QK1 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
VPS35Q96QK1 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS35Q96QK1 MTCYBP42-201ENST00000444653 1130 ntBASIC3.35□□□□□ -1.87
VPS35Q96QK1 RPL7P52-201ENST00000449200 742 ntBASIC3.35□□□□□ -1.87
VPS35Q96QK1 RPL21P104-201ENST00000464143 478 ntBASIC3.35□□□□□ -1.87
VPS35Q96QK1 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.35□□□□□ -1.87
VPS35Q96QK1 RPL7P5-201ENST00000471472 736 ntBASIC3.35□□□□□ -1.87
VPS35Q96QK1 AC021205.2-201ENST00000480069 347 ntBASIC3.35□□□□□ -1.87
VPS35Q96QK1 AC013828.1-201ENST00000481845 158 ntBASIC3.35□□□□□ -1.87
VPS35Q96QK1 AL024509.2-201ENST00000493462 493 ntBASIC3.35□□□□□ -1.87
VPS35Q96QK1 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VPS35Q96QK1 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS35Q96QK1 RNU6-1028P-201ENST00000517164 93 ntBASIC3.35□□□□□ -1.87
VPS35Q96QK1 AC107934.2-201ENST00000518653 310 ntBASIC3.35□□□□□ -1.87
VPS35Q96QK1 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS35Q96QK1 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS35Q96QK1 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS35Q96QK1 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VPS35Q96QK1 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC3.35□□□□□ -1.87
VPS35Q96QK1 AL121603.1-201ENST00000553815 142 ntBASIC3.35□□□□□ -1.87
VPS35Q96QK1 MIR5708-201ENST00000579723 85 ntBASIC3.35□□□□□ -1.87
VPS35Q96QK1 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS35Q96QK1 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS35Q96QK1 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS35Q96QK1 AL365400.2-201ENST00000605604 902 ntBASIC3.35□□□□□ -1.87
VPS35Q96QK1 AC091946.2-201ENST00000606105 291 ntBASIC3.35□□□□□ -1.87
VPS35Q96QK1 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.35□□□□□ -1.87
VPS35Q96QK1 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.35□□□□□ -1.87
VPS35Q96QK1 AC084757.4-201ENST00000616350 526 ntBASIC3.35□□□□□ -1.87
VPS35Q96QK1 AC012314.7-201ENST00000619693 93 ntBASIC3.35□□□□□ -1.87
VPS35Q96QK1 AL157770.1-201ENST00000623049 439 ntBASIC3.35□□□□□ -1.87
VPS35Q96QK1 AC092184.1-201ENST00000625042 715 ntBASIC3.35□□□□□ -1.87
VPS35Q96QK1 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.35□□□□□ -1.87
VPS35Q96QK1 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
VPS35Q96QK1 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
VPS35Q96QK1 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.34□□□□□ -1.87
VPS35Q96QK1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms