Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 BNIP3P6-201ENST00000549284 499 ntBASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 AC136443.5-201ENST00000603741 370 ntBASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 AC245389.1-201ENST00000605141 529 ntBASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 AC040168.1-201ENST00000623594 991 ntBASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SYNGAP1Q96PV0 ASNSP3-201ENST00000451989 1306 ntBASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 SCARNA15-201ENST00000607520 4325 ntBASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 RNU6-343P-201ENST00000364709 104 ntBASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 Y_RNA.373-201ENST00000365600 103 ntBASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 SNORA2.3-201ENST00000383920 135 ntBASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 ARF4P3-201ENST00000397387 509 ntBASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 AL023807.1-201ENST00000407932 359 ntBASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 RPL36AP36-201ENST00000418616 301 ntBASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 AC096632.1-201ENST00000427395 310 ntBASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 GTF2IP13-201ENST00000438487 386 ntBASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 RPS29P9-201ENST00000440360 171 ntBASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 AC079781.2-201ENST00000446424 169 ntBASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 AC004980.3-201ENST00000447046 365 ntBASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 AC005297.2-201ENST00000450430 606 ntBASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 AP1S2P1-201ENST00000457344 379 ntBASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 AL163973.1-201ENST00000484753 577 ntBASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 RPL23AP72-201ENST00000492447 435 ntBASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 KRTAP5-14P-201ENST00000502328 121 ntBASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 TTC39CP1-201ENST00000512513 755 ntBASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 Y_RNA.691-201ENST00000516611 103 ntBASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 RNU6-410P-201ENST00000517006 107 ntBASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 AC090572.1-201ENST00000519251 160 ntBASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 LSM6P2-201ENST00000552208 177 ntBASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 AC007151.1-201ENST00000572774 483 ntBASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 AC009318.4-201ENST00000620496 486 ntBASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
SYNGAP1Q96PV0 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 AC099654.2-201ENST00000433031 1980 ntBASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 AC011755.1-201ENST00000623763 2049 ntBASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 AC022031.1-201ENST00000585985 2593 ntBASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 SAMMSON-226ENST00000642089 1582 ntBASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 RNU4-1-201ENST00000363925 141 ntBASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 RNA5SP223-201ENST00000365174 120 ntBASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 SNORA33.2-201ENST00000365413 134 ntBASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 RNU6-921P-201ENST00000384361 107 ntBASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 SNORA37-201ENST00000384504 129 ntBASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 RPL21P67-201ENST00000402896 478 ntBASIC5.68□□□□□ -1.5
SYNGAP1Q96PV0 RPL23AP74-201ENST00000437246 471 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms