Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC2.96□□□□□ -1.94
COL21A1Q96P44 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC2.96□□□□□ -1.94
COL21A1Q96P44 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
COL21A1Q96P44 LYZ-203ENST00000549690 669 ntTSL 2 BASIC2.96□□□□□ -1.94
COL21A1Q96P44 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC2.96□□□□□ -1.94
COL21A1Q96P44 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC2.96□□□□□ -1.94
COL21A1Q96P44 AC106782.4-201ENST00000568264 210 ntBASIC2.96□□□□□ -1.94
COL21A1Q96P44 MIR2682-201ENST00000580305 110 ntBASIC2.96□□□□□ -1.94
COL21A1Q96P44 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.96□□□□□ -1.94
COL21A1Q96P44 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.96□□□□□ -1.94
COL21A1Q96P44 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC2.96□□□□□ -1.94
COL21A1Q96P44 AL031985.2-201ENST00000600955 480 ntBASIC2.96□□□□□ -1.94
COL21A1Q96P44 AC103881.1-201ENST00000603476 538 ntBASIC2.96□□□□□ -1.94
COL21A1Q96P44 AL590282.1-201ENST00000610379 1136 ntBASIC2.96□□□□□ -1.94
COL21A1Q96P44 uc_338.25-201ENST00000613756 156 ntBASIC2.96□□□□□ -1.94
COL21A1Q96P44 MIR8084-201ENST00000614105 89 ntBASIC2.96□□□□□ -1.94
COL21A1Q96P44 MIR7112-201ENST00000616126 65 ntBASIC2.96□□□□□ -1.94
COL21A1Q96P44 AC006963.1-201ENST00000624003 1052 ntBASIC2.96□□□□□ -1.94
COL21A1Q96P44 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC2.96□□□□□ -1.94
COL21A1Q96P44 AC002546.1-201ENST00000588041 2504 ntBASIC2.96□□□□□ -1.94
COL21A1Q96P44 DBF4P1-201ENST00000412976 1892 ntBASIC2.96□□□□□ -1.94
COL21A1Q96P44 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
COL21A1Q96P44 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.96□□□□□ -1.94
COL21A1Q96P44 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
COL21A1Q96P44 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
COL21A1Q96P44 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC2.95□□□□□ -1.94
COL21A1Q96P44 RNU6-600P-201ENST00000362524 99 ntBASIC2.95□□□□□ -1.94
COL21A1Q96P44 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.95□□□□□ -1.94
COL21A1Q96P44 RNA5SP56-201ENST00000410277 118 ntBASIC2.95□□□□□ -1.94
COL21A1Q96P44 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC2.95□□□□□ -1.94
COL21A1Q96P44 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.95□□□□□ -1.94
COL21A1Q96P44 AC006548.1-201ENST00000427470 102 ntBASIC2.95□□□□□ -1.94
COL21A1Q96P44 AC114973.1-201ENST00000429057 632 ntBASIC2.95□□□□□ -1.94
COL21A1Q96P44 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.95□□□□□ -1.94
COL21A1Q96P44 ZNF736P6Y-201ENST00000447526 1213 ntBASIC2.95□□□□□ -1.94
COL21A1Q96P44 AL096803.2-201ENST00000450032 677 ntBASIC2.95□□□□□ -1.94
COL21A1Q96P44 Z99714.1-201ENST00000450463 807 ntBASIC2.95□□□□□ -1.94
COL21A1Q96P44 CDC42P1-201ENST00000456658 548 ntBASIC2.95□□□□□ -1.94
COL21A1Q96P44 AC109925.1-201ENST00000478069 331 ntBASIC2.95□□□□□ -1.94
COL21A1Q96P44 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.95□□□□□ -1.94
COL21A1Q96P44 AC121161.1-201ENST00000510606 652 ntBASIC2.95□□□□□ -1.94
COL21A1Q96P44 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC2.95□□□□□ -1.94
COL21A1Q96P44 RPL12P22-201ENST00000519073 490 ntBASIC2.95□□□□□ -1.94
COL21A1Q96P44 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC2.95□□□□□ -1.94
COL21A1Q96P44 AC109635.4-202ENST00000531666 412 ntBASIC2.95□□□□□ -1.94
COL21A1Q96P44 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.95□□□□□ -1.94
COL21A1Q96P44 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC2.95□□□□□ -1.94
COL21A1Q96P44 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.95□□□□□ -1.94
COL21A1Q96P44 AL669831.4-202ENST00000590817 238 ntBASIC2.95□□□□□ -1.94
COL21A1Q96P44 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.95□□□□□ -1.94
COL21A1Q96P44 VIS1.1-201ENST00000610517 203 ntBASIC2.95□□□□□ -1.94
COL21A1Q96P44 CR381572.1-201ENST00000625098 102 ntBASIC2.95□□□□□ -1.94
COL21A1Q96P44 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
COL21A1Q96P44 FAM35CP-201ENST00000554755 2470 ntBASIC2.95□□□□□ -1.94
COL21A1Q96P44 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
COL21A1Q96P44 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
COL21A1Q96P44 AF117829.1-206ENST00000621883 3802 ntBASIC2.94□□□□□ -1.94
COL21A1Q96P44 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.94□□□□□ -1.94
COL21A1Q96P44 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
COL21A1Q96P44 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.94□□□□□ -1.94
COL21A1Q96P44 OR1S2-201ENST00000302592 978 ntBASIC2.94□□□□□ -1.94
COL21A1Q96P44 SNORA38.1-201ENST00000364172 131 ntBASIC2.94□□□□□ -1.94
COL21A1Q96P44 RNU6-549P-201ENST00000384433 107 ntBASIC2.94□□□□□ -1.94
COL21A1Q96P44 MIR649-201ENST00000384843 97 ntBASIC2.94□□□□□ -1.94
COL21A1Q96P44 SNORD65C-201ENST00000390962 71 ntBASIC2.94□□□□□ -1.94
COL21A1Q96P44 RNU6-932P-201ENST00000391108 106 ntBASIC2.94□□□□□ -1.94
COL21A1Q96P44 MTCO2P31-201ENST00000402702 684 ntBASIC2.94□□□□□ -1.94
COL21A1Q96P44 HIST1H2APS3-201ENST00000403259 134 ntBASIC2.94□□□□□ -1.94
COL21A1Q96P44 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC2.94□□□□□ -1.94
COL21A1Q96P44 AL353678.1-201ENST00000422735 741 ntBASIC2.94□□□□□ -1.94
COL21A1Q96P44 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC2.94□□□□□ -1.94
COL21A1Q96P44 RPL21P66-201ENST00000426566 466 ntBASIC2.94□□□□□ -1.94
COL21A1Q96P44 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC2.94□□□□□ -1.94
COL21A1Q96P44 AL512661.1-201ENST00000434586 1253 ntBASIC2.94□□□□□ -1.94
COL21A1Q96P44 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC2.94□□□□□ -1.94
COL21A1Q96P44 CYCSP32-201ENST00000440548 321 ntBASIC2.94□□□□□ -1.94
COL21A1Q96P44 RPS26P30-201ENST00000443431 335 ntBASIC2.94□□□□□ -1.94
COL21A1Q96P44 SLC31A1P1-201ENST00000451221 567 ntBASIC2.94□□□□□ -1.94
COL21A1Q96P44 RPS24P6-201ENST00000452670 400 ntBASIC2.94□□□□□ -1.94
COL21A1Q96P44 RPL21P18-201ENST00000469899 480 ntBASIC2.94□□□□□ -1.94
COL21A1Q96P44 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC2.94□□□□□ -1.94
COL21A1Q96P44 OR5H5P-201ENST00000503164 928 ntBASIC2.94□□□□□ -1.94
COL21A1Q96P44 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC2.94□□□□□ -1.94
COL21A1Q96P44 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC2.94□□□□□ -1.94
COL21A1Q96P44 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC2.94□□□□□ -1.94
COL21A1Q96P44 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC2.94□□□□□ -1.94
COL21A1Q96P44 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.94□□□□□ -1.94
COL21A1Q96P44 RNU6-416P-201ENST00000516265 103 ntBASIC2.94□□□□□ -1.94
COL21A1Q96P44 ARL2BPP5-201ENST00000523141 481 ntBASIC2.94□□□□□ -1.94
COL21A1Q96P44 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.94□□□□□ -1.94
COL21A1Q96P44 MIR4513-201ENST00000581077 86 ntBASIC2.94□□□□□ -1.94
COL21A1Q96P44 MIR5195-201ENST00000583555 115 ntBASIC2.94□□□□□ -1.94
COL21A1Q96P44 AC006116.7-201ENST00000590141 756 ntBASIC2.94□□□□□ -1.94
COL21A1Q96P44 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.94□□□□□ -1.94
COL21A1Q96P44 AC011468.4-201ENST00000603942 409 ntBASIC2.94□□□□□ -1.94
COL21A1Q96P44 AC013468.1-201ENST00000608680 598 ntBASIC2.94□□□□□ -1.94
COL21A1Q96P44 AL442067.2-201ENST00000614033 363 ntBASIC2.94□□□□□ -1.94
COL21A1Q96P44 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
COL21A1Q96P44 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
COL21A1Q96P44 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms