Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 RNU6-629P-201ENST00000384061 103 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 RNU6-549P-201ENST00000384433 107 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 U8.11-201ENST00000384699 133 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 U8.12-201ENST00000384701 133 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 Y_RNA.578-201ENST00000390903 88 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 AL079342.2-201ENST00000403367 482 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 RPS7P13-201ENST00000413955 498 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 LUZP4P1-201ENST00000415420 344 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 MTND4P3-201ENST00000417829 541 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.53□□□□□ -2
LINC00477Q96M19 RPL7P44-201ENST00000424827 742 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.53□□□□□ -2
LINC00477Q96M19 AC091390.1-201ENST00000433904 331 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 KCTD10P1-201ENST00000434203 625 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.53□□□□□ -2
LINC00477Q96M19 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.53□□□□□ -2
LINC00477Q96M19 HMGB3P11-201ENST00000440127 604 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 AC093155.1-201ENST00000440164 826 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 AL606517.1-201ENST00000446914 387 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 Z99127.3-201ENST00000448158 395 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 AC125238.1-201ENST00000448842 249 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC2.53□□□□□ -2
LINC00477Q96M19 AL445669.2-201ENST00000454425 421 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 U8.18-201ENST00000459285 133 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 AC103987.1-201ENST00000473394 348 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC2.53□□□□□ -2
LINC00477Q96M19 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.53□□□□□ -2
LINC00477Q96M19 POU5F1P7-201ENST00000508759 541 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC2.53□□□□□ -2
LINC00477Q96M19 TXNP6-201ENST00000510190 310 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 FCF1P8-201ENST00000510322 597 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 RPL7L1P13-201ENST00000511702 739 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 AC105914.1-201ENST00000511798 226 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 RN7SKP116-201ENST00000516902 319 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 SCARNA1-201ENST00000517138 166 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC2.53□□□□□ -2
LINC00477Q96M19 AC239860.2-201ENST00000525886 270 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 DEFB130C-202ENST00000530001 230 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 AC103843.2-201ENST00000530523 682 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC2.53□□□□□ -2
LINC00477Q96M19 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.53□□□□□ -2
LINC00477Q96M19 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC2.53□□□□□ -2
LINC00477Q96M19 SERPINE4P-201ENST00000554978 281 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.53□□□□□ -2
LINC00477Q96M19 AC107954.1-201ENST00000565906 727 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 BPTFP1-201ENST00000579209 492 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 MIR5708-201ENST00000579723 85 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 MAGOH2P-202ENST00000584384 429 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2.53□□□□□ -2
LINC00477Q96M19 AC008507.1-201ENST00000587506 734 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 MTCO2P2-201ENST00000591258 225 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 AC106052.1-201ENST00000608029 497 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC2.53□□□□□ -2
LINC00477Q96M19 PART1_2.1-201ENST00000612397 250 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 RDM1-219ENST00000615378 542 ntTSL 3 BASIC2.53□□□□□ -2
LINC00477Q96M19 AC022509.4-201ENST00000621404 572 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 AP003122.6-201ENST00000623831 495 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 AC098679.5-201ENST00000624394 571 ntBASIC2.53□□□□□ -2
LINC00477Q96M19 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.53□□□□□ -2
LINC00477Q96M19 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LINC00477Q96M19 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
LINC00477Q96M19 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC2.53□□□□□ -2
LINC00477Q96M19 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.53□□□□□ -2.01
LINC00477Q96M19 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LINC00477Q96M19 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
LINC00477Q96M19 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
LINC00477Q96M19 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LINC00477Q96M19 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC2.52□□□□□ -2.01
LINC00477Q96M19 RNU6-839P-201ENST00000363347 108 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 RNU6-1243P-201ENST00000364028 107 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 snoZ40.1-201ENST00000364540 72 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.52□□□□□ -2.01
LINC00477Q96M19 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
LINC00477Q96M19 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
LINC00477Q96M19 AL359837.1-201ENST00000381357 287 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 RNU6-224P-201ENST00000384055 107 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 SNORD116-12-201ENST00000384468 92 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 SNORD65.1-201ENST00000390889 71 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 RPL21P17-201ENST00000397467 475 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 RPL31P1-201ENST00000398116 372 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.52□□□□□ -2.01
LINC00477Q96M19 RPL5P18-201ENST00000406671 891 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 AL139098.1-201ENST00000407291 389 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC00477Q96M19 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC00477Q96M19 RPL32P35-201ENST00000415214 394 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 OR4K6P-201ENST00000416478 897 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 NANOGP5-201ENST00000424456 877 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC00477Q96M19 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC2.52□□□□□ -2.01
LINC00477Q96M19 AL445584.1-201ENST00000431451 330 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.52□□□□□ -2.01
LINC00477Q96M19 CST9LP2-201ENST00000437612 320 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC00477Q96M19 NOTCH2P1-201ENST00000443481 624 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC2.52□□□□□ -2.01
LINC00477Q96M19 AC073387.1-201ENST00000453261 709 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 HMGB1P15-201ENST00000453854 435 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 RPL7P15-201ENST00000461190 712 ntBASIC2.52□□□□□ -2.01
LINC00477Q96M19 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms