Protein–RNA interactions for Protein: Q96IU2

ZBED3, Zinc finger BED domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED3Q96IU2 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.33□□□□□ -1.88
ZBED3Q96IU2 BMS1P22-201ENST00000414726 313 ntBASIC3.33□□□□□ -1.88
ZBED3Q96IU2 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.33□□□□□ -1.88
ZBED3Q96IU2 RPS15AP6-201ENST00000420703 385 ntBASIC3.33□□□□□ -1.88
ZBED3Q96IU2 GTF2IP23-201ENST00000423746 351 ntBASIC3.33□□□□□ -1.88
ZBED3Q96IU2 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC3.33□□□□□ -1.88
ZBED3Q96IU2 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.33□□□□□ -1.88
ZBED3Q96IU2 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.33□□□□□ -1.88
ZBED3Q96IU2 AL035407.2-201ENST00000454090 378 ntBASIC3.33□□□□□ -1.88
ZBED3Q96IU2 AC104689.1-201ENST00000473356 768 ntBASIC3.33□□□□□ -1.88
ZBED3Q96IU2 HMGN2P13-201ENST00000476476 274 ntBASIC3.33□□□□□ -1.88
ZBED3Q96IU2 RPL23AP44-201ENST00000482216 473 ntBASIC3.33□□□□□ -1.88
ZBED3Q96IU2 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.33□□□□□ -1.88
ZBED3Q96IU2 RN7SL633P-201ENST00000488974 297 ntBASIC3.33□□□□□ -1.88
ZBED3Q96IU2 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.33□□□□□ -1.88
ZBED3Q96IU2 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ZBED3Q96IU2 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
ZBED3Q96IU2 AL442163.2-201ENST00000553912 710 ntBASIC3.33□□□□□ -1.88
ZBED3Q96IU2 EIF5A2P1-201ENST00000564027 460 ntBASIC3.33□□□□□ -1.88
ZBED3Q96IU2 AL109653.1-201ENST00000603091 248 ntBASIC3.33□□□□□ -1.88
ZBED3Q96IU2 AC073111.2-201ENST00000605657 1075 ntBASIC3.33□□□□□ -1.88
ZBED3Q96IU2 AC026790.2-201ENST00000606282 430 ntBASIC3.33□□□□□ -1.88
ZBED3Q96IU2 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ZBED3Q96IU2 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
ZBED3Q96IU2 AC107081.3-201ENST00000612715 2034 ntBASIC3.32□□□□□ -1.88
ZBED3Q96IU2 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ZBED3Q96IU2 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ZBED3Q96IU2 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ZBED3Q96IU2 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ZBED3Q96IU2 RNU6-837P-201ENST00000391056 108 ntBASIC3.32□□□□□ -1.88
ZBED3Q96IU2 RNA5SP107-201ENST00000411358 122 ntBASIC3.32□□□□□ -1.88
ZBED3Q96IU2 AC073264.1-201ENST00000411508 416 ntBASIC3.32□□□□□ -1.88
ZBED3Q96IU2 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.32□□□□□ -1.88
ZBED3Q96IU2 RPL31P12-201ENST00000422587 358 ntBASIC3.32□□□□□ -1.88
ZBED3Q96IU2 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC3.32□□□□□ -1.88
ZBED3Q96IU2 AC092685.1-201ENST00000447960 1243 ntBASIC3.32□□□□□ -1.88
ZBED3Q96IU2 RPS15AP1-201ENST00000457423 391 ntBASIC3.32□□□□□ -1.88
ZBED3Q96IU2 AL024509.2-201ENST00000493462 493 ntBASIC3.32□□□□□ -1.88
ZBED3Q96IU2 AC091917.2-201ENST00000505002 744 ntBASIC3.32□□□□□ -1.88
ZBED3Q96IU2 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC3.32□□□□□ -1.88
ZBED3Q96IU2 AC010265.1-201ENST00000513509 211 ntBASIC3.32□□□□□ -1.88
ZBED3Q96IU2 RNU6-711P-201ENST00000517255 106 ntBASIC3.32□□□□□ -1.88
ZBED3Q96IU2 AC104997.1-201ENST00000519761 717 ntBASIC3.32□□□□□ -1.88
ZBED3Q96IU2 HMGB1P46-201ENST00000520062 610 ntBASIC3.32□□□□□ -1.88
ZBED3Q96IU2 AC008676.3-201ENST00000521237 435 ntBASIC3.32□□□□□ -1.88
ZBED3Q96IU2 AC019227.1-201ENST00000526902 510 ntBASIC3.32□□□□□ -1.88
ZBED3Q96IU2 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.32□□□□□ -1.88
ZBED3Q96IU2 AC007954.1-201ENST00000554198 494 ntBASIC3.32□□□□□ -1.88
ZBED3Q96IU2 AC107954.1-201ENST00000565906 727 ntBASIC3.32□□□□□ -1.88
ZBED3Q96IU2 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.32□□□□□ -1.88
ZBED3Q96IU2 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.32□□□□□ -1.88
ZBED3Q96IU2 AL133393.1-201ENST00000603277 287 ntBASIC3.32□□□□□ -1.88
ZBED3Q96IU2 AC087241.4-201ENST00000612441 480 ntBASIC3.32□□□□□ -1.88
ZBED3Q96IU2 MIR6817-201ENST00000615588 66 ntBASIC3.32□□□□□ -1.88
ZBED3Q96IU2 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.32□□□□□ -1.88
ZBED3Q96IU2 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
ZBED3Q96IU2 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ZBED3Q96IU2 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ZBED3Q96IU2 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
ZBED3Q96IU2 ZNF37BP-203ENST00000452306 1352 ntBASIC3.31□□□□□ -1.88
ZBED3Q96IU2 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
ZBED3Q96IU2 U3.6-201ENST00000363622 211 ntBASIC3.31□□□□□ -1.88
ZBED3Q96IU2 U3.11-201ENST00000364476 212 ntBASIC3.31□□□□□ -1.88
ZBED3Q96IU2 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
ZBED3Q96IU2 SAR1AP2-201ENST00000392696 594 ntBASIC3.31□□□□□ -1.88
ZBED3Q96IU2 RNU4-74P-201ENST00000411280 161 ntBASIC3.31□□□□□ -1.88
ZBED3Q96IU2 AC010385.1-201ENST00000412374 256 ntBASIC3.31□□□□□ -1.88
ZBED3Q96IU2 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ZBED3Q96IU2 TOMM22P1-201ENST00000418578 312 ntBASIC3.31□□□□□ -1.88
ZBED3Q96IU2 OR2AS1P-201ENST00000427827 319 ntBASIC3.31□□□□□ -1.88
ZBED3Q96IU2 DPPA2P1-201ENST00000428060 556 ntBASIC3.31□□□□□ -1.88
ZBED3Q96IU2 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.31□□□□□ -1.88
ZBED3Q96IU2 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ZBED3Q96IU2 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC3.31□□□□□ -1.88
ZBED3Q96IU2 AC093392.2-201ENST00000450682 337 ntBASIC3.31□□□□□ -1.88
ZBED3Q96IU2 HSPE1P6-201ENST00000479457 291 ntBASIC3.31□□□□□ -1.88
ZBED3Q96IU2 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.31□□□□□ -1.88
ZBED3Q96IU2 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.31□□□□□ -1.88
ZBED3Q96IU2 SNORA64.4-201ENST00000516632 81 ntBASIC3.31□□□□□ -1.88
ZBED3Q96IU2 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.31□□□□□ -1.88
ZBED3Q96IU2 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.31□□□□□ -1.88
ZBED3Q96IU2 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.31□□□□□ -1.88
ZBED3Q96IU2 EIF1AXP2-201ENST00000555940 413 ntBASIC3.31□□□□□ -1.88
ZBED3Q96IU2 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.31□□□□□ -1.88
ZBED3Q96IU2 MTCO3P24-201ENST00000572729 782 ntBASIC3.31□□□□□ -1.88
ZBED3Q96IU2 AC005951.1-201ENST00000576706 485 ntBASIC3.31□□□□□ -1.88
ZBED3Q96IU2 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
ZBED3Q96IU2 AL390240.1-201ENST00000612950 384 ntBASIC3.31□□□□□ -1.88
ZBED3Q96IU2 AL590808.1-201ENST00000618696 141 ntBASIC3.31□□□□□ -1.88
ZBED3Q96IU2 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ZBED3Q96IU2 AC116096.1-201ENST00000566804 2314 ntBASIC3.31□□□□□ -1.88
ZBED3Q96IU2 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ZBED3Q96IU2 AC110774.1-201ENST00000623567 2018 ntBASIC3.31□□□□□ -1.88
ZBED3Q96IU2 ELL2P4-201ENST00000446870 1376 ntBASIC3.3□□□□□ -1.88
ZBED3Q96IU2 ASNSP3-201ENST00000451989 1306 ntBASIC3.3□□□□□ -1.88
ZBED3Q96IU2 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ZBED3Q96IU2 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
ZBED3Q96IU2 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
ZBED3Q96IU2 RPL31P1-201ENST00000398116 372 ntBASIC3.3□□□□□ -1.88
ZBED3Q96IU2 AL356057.3-201ENST00000402607 340 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms