Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 MTATP6P15-201ENST00000527233 835 ntBASIC3.39□□□□□ -1.87
RFT1Q96AA3 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.39□□□□□ -1.87
RFT1Q96AA3 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.39□□□□□ -1.87
RFT1Q96AA3 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.39□□□□□ -1.87
RFT1Q96AA3 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.39□□□□□ -1.87
RFT1Q96AA3 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RFT1Q96AA3 MIR4425-201ENST00000580572 84 ntBASIC3.39□□□□□ -1.87
RFT1Q96AA3 AC007448.1-201ENST00000582714 234 ntBASIC3.39□□□□□ -1.87
RFT1Q96AA3 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC3.39□□□□□ -1.87
RFT1Q96AA3 MIR3138-201ENST00000585238 82 ntBASIC3.39□□□□□ -1.87
RFT1Q96AA3 AC040904.1-201ENST00000590850 223 ntBASIC3.39□□□□□ -1.87
RFT1Q96AA3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC3.39□□□□□ -1.87
RFT1Q96AA3 AC107952.2-201ENST00000606048 486 ntBASIC3.39□□□□□ -1.87
RFT1Q96AA3 RMST_8.1-201ENST00000610287 165 ntBASIC3.39□□□□□ -1.87
RFT1Q96AA3 MIR8059-201ENST00000620427 81 ntBASIC3.39□□□□□ -1.87
RFT1Q96AA3 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
RFT1Q96AA3 AC005539.1-201ENST00000443768 1479 ntBASIC3.39□□□□□ -1.87
RFT1Q96AA3 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
RFT1Q96AA3 RIOK3P1-201ENST00000418778 1528 ntBASIC3.39□□□□□ -1.87
RFT1Q96AA3 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.39□□□□□ -1.87
RFT1Q96AA3 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RFT1Q96AA3 DDX43P2-201ENST00000604753 1354 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFT1Q96AA3 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.38□□□□□ -1.87
RFT1Q96AA3 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.38□□□□□ -1.87
RFT1Q96AA3 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFT1Q96AA3 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RFT1Q96AA3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFT1Q96AA3 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFT1Q96AA3 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFT1Q96AA3 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFT1Q96AA3 CYCSP45-201ENST00000402289 315 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.38□□□□□ -1.87
RFT1Q96AA3 RN7SKP33-201ENST00000410942 340 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 SNORA57.3-201ENST00000411095 141 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 TPMTP2-201ENST00000414372 726 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RFT1Q96AA3 HIGD1AP15-201ENST00000416198 280 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.38□□□□□ -1.87
RFT1Q96AA3 AL953862.1-201ENST00000423016 168 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.38□□□□□ -1.87
RFT1Q96AA3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.38□□□□□ -1.87
RFT1Q96AA3 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 VDAC1P3-201ENST00000434069 851 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 TBCAP1-201ENST00000436520 327 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 SNORA71B-202ENST00000439232 272 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 MTND3P1-201ENST00000441336 220 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 AL662791.1-201ENST00000441992 928 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 MTND2P22-201ENST00000444325 1033 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.38□□□□□ -1.87
RFT1Q96AA3 AL122001.1-201ENST00000457027 370 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.38□□□□□ -1.87
RFT1Q96AA3 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 AL132838.2-201ENST00000492041 314 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.38□□□□□ -1.87
RFT1Q96AA3 AL024509.2-201ENST00000493462 493 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.38□□□□□ -1.87
RFT1Q96AA3 AC096751.1-202ENST00000502691 1067 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC3.38□□□□□ -1.87
RFT1Q96AA3 AC091951.3-201ENST00000504093 246 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 AC026784.1-201ENST00000507986 352 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.38□□□□□ -1.87
RFT1Q96AA3 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RFT1Q96AA3 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.38□□□□□ -1.87
RFT1Q96AA3 RNU6-1095P-201ENST00000516148 108 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 RNU5A-4P-201ENST00000516588 111 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 RN7SKP60-201ENST00000516985 239 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 RPL12P22-201ENST00000519073 490 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 AC022861.1-201ENST00000522981 663 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.38□□□□□ -1.87
RFT1Q96AA3 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.38□□□□□ -1.87
RFT1Q96AA3 AC126177.3-201ENST00000551839 688 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
RFT1Q96AA3 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.38□□□□□ -1.87
RFT1Q96AA3 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.38□□□□□ -1.87
RFT1Q96AA3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.38□□□□□ -1.87
RFT1Q96AA3 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC3.38□□□□□ -1.87
RFT1Q96AA3 AC022022.2-201ENST00000602989 360 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 AC004987.4-201ENST00000603383 338 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.38□□□□□ -1.87
RFT1Q96AA3 AC011330.2-201ENST00000621680 635 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 AL353748.2-201ENST00000622148 471 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 AP002782.1-201ENST00000623107 614 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 AC010608.2-201ENST00000624830 470 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 MIR7153-201ENST00000637758 57 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.38□□□□□ -1.87
RFT1Q96AA3 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFT1Q96AA3 ZNF876P-202ENST00000398732 1485 ntBASIC3.38□□□□□ -1.87
RFT1Q96AA3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
RFT1Q96AA3 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFT1Q96AA3 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.38□□□□□ -1.87
RFT1Q96AA3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFT1Q96AA3 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
RFT1Q96AA3 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
RFT1Q96AA3 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
RFT1Q96AA3 FAM133CP-201ENST00000332869 704 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 RNU6-157P-201ENST00000383957 107 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 SNORA48.8-201ENST00000391324 134 ntBASIC3.37□□□□□ -1.87
RFT1Q96AA3 RNU4-6P-201ENST00000410804 122 ntBASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms