Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 AC004584.2-201ENST00000570407 410 ntBASIC6.28□□□□□ -1.4
HLA-CQ95604 MIR548AI-201ENST00000579940 88 ntBASIC6.28□□□□□ -1.4
HLA-CQ95604 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC6.28□□□□□ -1.4
HLA-CQ95604 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.28□□□□□ -1.4
HLA-CQ95604 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC6.28□□□□□ -1.4
HLA-CQ95604 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-CQ95604 MIR8080-201ENST00000622224 89 ntBASIC6.28□□□□□ -1.4
HLA-CQ95604 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
HLA-CQ95604 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.28□□□□□ -1.4
HLA-CQ95604 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.28□□□□□ -1.4
HLA-CQ95604 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
HLA-CQ95604 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-CQ95604 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-CQ95604 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-CQ95604 THAP9-201ENST00000302236 3808 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-CQ95604 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
HLA-CQ95604 ZNF625-ZNF20-201ENST00000430024 2651 ntAPPRIS P5 TSL 5 BASIC6.27□□□□□ -1.41
HLA-CQ95604 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-CQ95604 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-CQ95604 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-CQ95604 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.27□□□□□ -1.41
HLA-CQ95604 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
HLA-CQ95604 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HLA-CQ95604 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-CQ95604 RNU1-76P-201ENST00000362903 159 ntBASIC6.27□□□□□ -1.41
HLA-CQ95604 RNU6-790P-201ENST00000384479 105 ntBASIC6.27□□□□□ -1.41
HLA-CQ95604 PCNPP3-201ENST00000393579 471 ntBASIC6.27□□□□□ -1.41
HLA-CQ95604 AF015262.1-201ENST00000455028 698 ntTSL 3 BASIC6.27□□□□□ -1.41
HLA-CQ95604 AL139109.1-201ENST00000455491 297 ntBASIC6.27□□□□□ -1.41
HLA-CQ95604 RN7SL583P-201ENST00000475692 287 ntBASIC6.27□□□□□ -1.41
HLA-CQ95604 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC6.27□□□□□ -1.41
HLA-CQ95604 RN7SKP60-201ENST00000516985 239 ntBASIC6.27□□□□□ -1.41
HLA-CQ95604 AL358913.1-201ENST00000554342 121 ntBASIC6.27□□□□□ -1.41
HLA-CQ95604 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC6.27□□□□□ -1.41
HLA-CQ95604 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.27□□□□□ -1.41
HLA-CQ95604 AC009852.2-201ENST00000567898 485 ntBASIC6.27□□□□□ -1.41
HLA-CQ95604 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
HLA-CQ95604 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC6.27□□□□□ -1.41
HLA-CQ95604 AC006557.5-201ENST00000603126 811 ntBASIC6.27□□□□□ -1.41
HLA-CQ95604 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC6.27□□□□□ -1.41
HLA-CQ95604 AC141002.1-201ENST00000607025 279 ntBASIC6.27□□□□□ -1.41
HLA-CQ95604 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.27□□□□□ -1.41
HLA-CQ95604 AC005344.1-201ENST00000613391 459 ntBASIC6.27□□□□□ -1.41
HLA-CQ95604 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
HLA-CQ95604 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-CQ95604 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
HLA-CQ95604 AC000374.1-201ENST00000434698 1745 ntBASIC6.27□□□□□ -1.41
HLA-CQ95604 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.27□□□□□ -1.41
HLA-CQ95604 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-CQ95604 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
HLA-CQ95604 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
HLA-CQ95604 AC024587.1-201ENST00000505925 2157 ntBASIC6.27□□□□□ -1.41
HLA-CQ95604 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
HLA-CQ95604 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC6.27□□□□□ -1.41
HLA-CQ95604 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-CQ95604 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-CQ95604 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
HLA-CQ95604 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.26□□□□□ -1.41
HLA-CQ95604 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.26□□□□□ -1.41
HLA-CQ95604 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-CQ95604 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC6.26□□□□□ -1.41
HLA-CQ95604 AL391987.6-201ENST00000305671 199 ntBASIC6.26□□□□□ -1.41
HLA-CQ95604 RNA5SP478-201ENST00000364657 115 ntBASIC6.26□□□□□ -1.41
HLA-CQ95604 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC6.26□□□□□ -1.41
HLA-CQ95604 AL109941.1-201ENST00000401925 229 ntBASIC6.26□□□□□ -1.41
HLA-CQ95604 RNA5SP36-201ENST00000410197 133 ntBASIC6.26□□□□□ -1.41
HLA-CQ95604 MRPL53P1-201ENST00000414323 319 ntBASIC6.26□□□□□ -1.41
HLA-CQ95604 SRSF1P1-201ENST00000424058 520 ntBASIC6.26□□□□□ -1.41
HLA-CQ95604 UBE2D3P2-201ENST00000424409 445 ntBASIC6.26□□□□□ -1.41
HLA-CQ95604 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC6.26□□□□□ -1.41
HLA-CQ95604 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.26□□□□□ -1.41
HLA-CQ95604 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.26□□□□□ -1.41
HLA-CQ95604 CYCSP43-201ENST00000438233 310 ntBASIC6.26□□□□□ -1.41
HLA-CQ95604 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.26□□□□□ -1.41
HLA-CQ95604 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.26□□□□□ -1.41
HLA-CQ95604 OR2AQ1P-201ENST00000451972 200 ntBASIC6.26□□□□□ -1.41
HLA-CQ95604 RN7SL97P-201ENST00000486780 299 ntBASIC6.26□□□□□ -1.41
HLA-CQ95604 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC6.26□□□□□ -1.41
HLA-CQ95604 AC087369.1-201ENST00000520775 996 ntBASIC6.26□□□□□ -1.41
HLA-CQ95604 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC6.26□□□□□ -1.41
HLA-CQ95604 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC6.26□□□□□ -1.41
HLA-CQ95604 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.26□□□□□ -1.41
HLA-CQ95604 AC100827.5-201ENST00000615883 426 ntBASIC6.26□□□□□ -1.41
HLA-CQ95604 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC6.26□□□□□ -1.41
HLA-CQ95604 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-CQ95604 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-CQ95604 AC009229.4-201ENST00000623854 1947 ntBASIC6.26□□□□□ -1.41
HLA-CQ95604 DDX18P3-201ENST00000404856 2007 ntBASIC6.26□□□□□ -1.41
HLA-CQ95604 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
HLA-CQ95604 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC6.26□□□□□ -1.41
HLA-CQ95604 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
HLA-CQ95604 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.26□□□□□ -1.41
HLA-CQ95604 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
HLA-CQ95604 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-CQ95604 GARNL3-202ENST00000373387 3800 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-CQ95604 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HLA-CQ95604 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
HLA-CQ95604 GUCY1B2-204ENST00000531898 1979 ntBASIC6.26□□□□□ -1.41
HLA-CQ95604 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
HLA-CQ95604 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms