Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 RPL23AP41-201ENST00000484754 458 ntBASIC8.98□□□□□ -0.97
TRIM41Q8WV44 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC8.98□□□□□ -0.97
TRIM41Q8WV44 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC8.98□□□□□ -0.97
TRIM41Q8WV44 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC8.98□□□□□ -0.97
TRIM41Q8WV44 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC8.98□□□□□ -0.97
TRIM41Q8WV44 AC018552.3-201ENST00000567416 561 ntBASIC8.98□□□□□ -0.97
TRIM41Q8WV44 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC8.98□□□□□ -0.97
TRIM41Q8WV44 AL670379.11-201ENST00000604059 253 ntBASIC8.98□□□□□ -0.97
TRIM41Q8WV44 AL670379.10-201ENST00000604330 253 ntBASIC8.98□□□□□ -0.97
TRIM41Q8WV44 AL670379.12-201ENST00000605291 253 ntBASIC8.98□□□□□ -0.97
TRIM41Q8WV44 AL670379.9-201ENST00000605428 253 ntBASIC8.98□□□□□ -0.97
TRIM41Q8WV44 AC006157.1-201ENST00000611750 366 ntBASIC8.98□□□□□ -0.97
TRIM41Q8WV44 AC012409.4-201ENST00000612923 249 ntBASIC8.98□□□□□ -0.97
TRIM41Q8WV44 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
TRIM41Q8WV44 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC8.98□□□□□ -0.97
TRIM41Q8WV44 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TRIM41Q8WV44 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
TRIM41Q8WV44 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
TRIM41Q8WV44 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
TRIM41Q8WV44 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
TRIM41Q8WV44 AL355488.2-201ENST00000609909 2850 ntBASIC8.98□□□□□ -0.97
TRIM41Q8WV44 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
TRIM41Q8WV44 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
TRIM41Q8WV44 AC004972.1-201ENST00000623934 2209 ntBASIC8.97□□□□□ -0.97
TRIM41Q8WV44 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
TRIM41Q8WV44 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
TRIM41Q8WV44 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC8.97□□□□□ -0.97
TRIM41Q8WV44 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
TRIM41Q8WV44 AC092681.1-201ENST00000297369 291 ntBASIC8.97□□□□□ -0.97
TRIM41Q8WV44 SNURFL-201ENST00000309296 343 ntBASIC8.97□□□□□ -0.97
TRIM41Q8WV44 AL161781.1-201ENST00000354277 403 ntBASIC8.97□□□□□ -0.97
TRIM41Q8WV44 RNU6-1040P-201ENST00000383974 107 ntBASIC8.97□□□□□ -0.97
TRIM41Q8WV44 RNU6-39P-201ENST00000384344 107 ntBASIC8.97□□□□□ -0.97
TRIM41Q8WV44 RNA5SP345-201ENST00000410646 108 ntBASIC8.97□□□□□ -0.97
TRIM41Q8WV44 OR6C66P-201ENST00000414917 930 ntBASIC8.97□□□□□ -0.97
TRIM41Q8WV44 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC8.97□□□□□ -0.97
TRIM41Q8WV44 AC099670.2-201ENST00000435130 321 ntBASIC8.97□□□□□ -0.97
TRIM41Q8WV44 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC8.97□□□□□ -0.97
TRIM41Q8WV44 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC8.97□□□□□ -0.97
TRIM41Q8WV44 AC114495.1-201ENST00000441274 436 ntBASIC8.97□□□□□ -0.97
TRIM41Q8WV44 REG1CP-206ENST00000447469 496 ntBASIC8.97□□□□□ -0.97
TRIM41Q8WV44 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC8.97□□□□□ -0.97
TRIM41Q8WV44 AC026726.1-201ENST00000512859 601 ntBASIC8.97□□□□□ -0.97
TRIM41Q8WV44 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC8.97□□□□□ -0.97
TRIM41Q8WV44 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC8.97□□□□□ -0.97
TRIM41Q8WV44 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC8.97□□□□□ -0.97
TRIM41Q8WV44 AL118558.2-201ENST00000556294 238 ntBASIC8.97□□□□□ -0.97
TRIM41Q8WV44 AC105224.1-201ENST00000587055 421 ntBASIC8.97□□□□□ -0.97
TRIM41Q8WV44 AC108738.1-201ENST00000603703 237 ntBASIC8.97□□□□□ -0.97
TRIM41Q8WV44 uc_338.7-201ENST00000621834 124 ntBASIC8.97□□□□□ -0.97
TRIM41Q8WV44 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC8.97□□□□□ -0.97
TRIM41Q8WV44 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC8.97□□□□□ -0.97
TRIM41Q8WV44 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC8.97□□□□□ -0.97
TRIM41Q8WV44 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC8.97□□□□□ -0.97
TRIM41Q8WV44 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
TRIM41Q8WV44 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
TRIM41Q8WV44 AL034549.2-201ENST00000618285 3373 ntBASIC8.96□□□□□ -0.97
TRIM41Q8WV44 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
TRIM41Q8WV44 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC8.96□□□□□ -0.97
TRIM41Q8WV44 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC8.96□□□□□ -0.97
TRIM41Q8WV44 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
TRIM41Q8WV44 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.98
TRIM41Q8WV44 RNA5SP28-201ENST00000363841 119 ntBASIC8.96□□□□□ -0.98
TRIM41Q8WV44 RNU6-1026P-201ENST00000384465 108 ntBASIC8.96□□□□□ -0.98
TRIM41Q8WV44 RNU6-601P-201ENST00000384540 107 ntBASIC8.96□□□□□ -0.98
TRIM41Q8WV44 RNU6-310P-201ENST00000384655 107 ntBASIC8.96□□□□□ -0.98
TRIM41Q8WV44 MIR105-1-201ENST00000385222 81 ntBASIC8.96□□□□□ -0.98
TRIM41Q8WV44 MIR454-201ENST00000390180 115 ntBASIC8.96□□□□□ -0.98
TRIM41Q8WV44 HSPA8P15-201ENST00000401676 786 ntBASIC8.96□□□□□ -0.98
TRIM41Q8WV44 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC8.96□□□□□ -0.98
TRIM41Q8WV44 PDSS1P1-201ENST00000422953 1114 ntBASIC8.96□□□□□ -0.98
TRIM41Q8WV44 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC8.96□□□□□ -0.98
TRIM41Q8WV44 AL162395.1-201ENST00000457882 422 ntBASIC8.96□□□□□ -0.98
TRIM41Q8WV44 AC128713.1-201ENST00000471495 306 ntBASIC8.96□□□□□ -0.98
TRIM41Q8WV44 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC8.96□□□□□ -0.98
TRIM41Q8WV44 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
TRIM41Q8WV44 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC8.96□□□□□ -0.98
TRIM41Q8WV44 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC8.96□□□□□ -0.98
TRIM41Q8WV44 AC023575.1-201ENST00000580510 358 ntBASIC8.96□□□□□ -0.98
TRIM41Q8WV44 AC068790.3-201ENST00000602988 553 ntBASIC8.96□□□□□ -0.98
TRIM41Q8WV44 AL160281.1-201ENST00000605307 311 ntBASIC8.96□□□□□ -0.98
TRIM41Q8WV44 HSPE1P14-201ENST00000605812 302 ntBASIC8.96□□□□□ -0.98
TRIM41Q8WV44 MIR6716-201ENST00000613413 80 ntBASIC8.96□□□□□ -0.98
TRIM41Q8WV44 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
TRIM41Q8WV44 PNPT1P2-201ENST00000456768 2050 ntBASIC8.96□□□□□ -0.98
TRIM41Q8WV44 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
TRIM41Q8WV44 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
TRIM41Q8WV44 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
TRIM41Q8WV44 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC8.96□□□□□ -0.98
TRIM41Q8WV44 DNM1P47-203ENST00000571780 12667 ntBASIC8.96□□□□□ -0.98
TRIM41Q8WV44 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
TRIM41Q8WV44 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
TRIM41Q8WV44 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC8.96□□□□□ -0.98
TRIM41Q8WV44 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC8.95□□□□□ -0.98
TRIM41Q8WV44 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TRIM41Q8WV44 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
TRIM41Q8WV44 RNU6-1115P-201ENST00000362490 106 ntBASIC8.95□□□□□ -0.98
TRIM41Q8WV44 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC8.95□□□□□ -0.98
TRIM41Q8WV44 SOD2P1-201ENST00000396543 562 ntBASIC8.95□□□□□ -0.98
TRIM41Q8WV44 AL078599.1-201ENST00000402075 293 ntBASIC8.95□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms