Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 NSRP1P1-201ENST00000444067 1693 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 RNU6-1159P-201ENST00000362933 107 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 HSPE1P28-201ENST00000443139 211 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 AC078814.3-201ENST00000553036 491 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 MIR4716-201ENST00000579628 84 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 AC022069.1-201ENST00000582910 658 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 MIR4635-201ENST00000583759 79 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 AL353743.4-201ENST00000422653 1547 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 RNU1-73P-201ENST00000383971 164 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 AL591416.1-201ENST00000404015 867 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 AC092013.1-201ENST00000438795 332 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 RPL9P33-201ENST00000484311 566 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 RPL36AP21-201ENST00000490372 323 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 AC106872.3-201ENST00000495104 446 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 OR5BN1P-201ENST00000532955 829 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 AC000123.2-201ENST00000623124 461 ntBASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC1.69□□□□□ -2.14
ALMS1Q8TCU4 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 MIR7-2-201ENST00000384970 110 ntBASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 RN7SKP32-201ENST00000410167 303 ntBASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 RNU2-6P-201ENST00000411404 190 ntBASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 AC010928.3-201ENST00000587712 541 ntBASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 VN1R9P-201ENST00000614184 867 ntBASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 U4.3-201ENST00000621047 82 ntBASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 AC103798.2-201ENST00000624292 632 ntBASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 NPM1P10-201ENST00000398310 865 ntBASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 AL024474.1-201ENST00000404655 591 ntBASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 GSTA9P-201ENST00000406231 611 ntBASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 NF1P5-201ENST00000588287 448 ntBASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 ABI1P1-201ENST00000603375 1120 ntBASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 AC067747.1-201ENST00000608026 250 ntBASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 AL162233.1-201ENST00000620014 944 ntBASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 RNU1-35P-201ENST00000362782 153 ntBASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 AL121882.1-201ENST00000422893 417 ntBASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 AL009174.1-201ENST00000426577 416 ntBASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 RPL7P5-201ENST00000471472 736 ntBASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 AC092451.1-201ENST00000480211 153 ntBASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 RGS4-209ENST00000531057 544 ntTSL 4 BASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 AC128657.1-201ENST00000549459 145 ntBASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 AC006116.7-201ENST00000590141 756 ntBASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 AC009570.1-201ENST00000609599 745 ntBASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
ALMS1Q8TCU4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.67□□□□□ -2.14
ALMS1Q8TCU4 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.67□□□□□ -2.14
ALMS1Q8TCU4 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
ALMS1Q8TCU4 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.67□□□□□ -2.14
ALMS1Q8TCU4 AC245100.2-201ENST00000454544 1679 ntBASIC1.67□□□□□ -2.14
ALMS1Q8TCU4 Y_RNA.508-201ENST00000384502 114 ntBASIC1.67□□□□□ -2.14
ALMS1Q8TCU4 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
ALMS1Q8TCU4 ATG3P1-201ENST00000419507 911 ntBASIC1.67□□□□□ -2.14
ALMS1Q8TCU4 CYCSP49-201ENST00000420810 319 ntBASIC1.67□□□□□ -2.14
ALMS1Q8TCU4 AC023128.2-201ENST00000420880 1223 ntBASIC1.67□□□□□ -2.14
ALMS1Q8TCU4 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC1.67□□□□□ -2.14
ALMS1Q8TCU4 RPL7P46-201ENST00000425129 740 ntBASIC1.67□□□□□ -2.14
ALMS1Q8TCU4 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC1.67□□□□□ -2.14
ALMS1Q8TCU4 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC1.67□□□□□ -2.14
ALMS1Q8TCU4 AC004486.1-201ENST00000546846 233 ntBASIC1.67□□□□□ -2.14
ALMS1Q8TCU4 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
ALMS1Q8TCU4 AC006378.2-201ENST00000623178 2476 ntBASIC1.67□□□□□ -2.14
ALMS1Q8TCU4 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC1.67□□□□□ -2.14
ALMS1Q8TCU4 AL118496.1-201ENST00000440201 1812 ntBASIC1.67□□□□□ -2.14
ALMS1Q8TCU4 AL356292.1-201ENST00000283110 373 ntBASIC1.67□□□□□ -2.14
ALMS1Q8TCU4 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC1.67□□□□□ -2.14
ALMS1Q8TCU4 RN7SL283P-201ENST00000489055 303 ntBASIC1.67□□□□□ -2.14
ALMS1Q8TCU4 RN7SKP282-201ENST00000516824 299 ntBASIC1.67□□□□□ -2.14
ALMS1Q8TCU4 AC100870.1-201ENST00000522035 505 ntBASIC1.67□□□□□ -2.14
ALMS1Q8TCU4 CR589904.2-201ENST00000612533 440 ntBASIC1.67□□□□□ -2.14
ALMS1Q8TCU4 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms