Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 BNIP3P33-201ENST00000598912 569 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 ELOCP35-201ENST00000604289 336 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 AC011816.2-201ENST00000607089 556 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 AC009974.1-201ENST00000608881 455 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 AC091046.2-201ENST00000620775 665 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 AC022509.4-201ENST00000621404 572 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 AC073348.1-201ENST00000623002 331 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 AC004777.1-201ENST00000624317 287 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 AC109315.1-201ENST00000584143 1347 ntBASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
C9orf40Q8IXQ3 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 MT-TC-201ENST00000387405 66 ntBASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 ERHP2-201ENST00000402323 299 ntBASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 RPS15AP6-201ENST00000420703 385 ntBASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 OFD1P18Y-201ENST00000420889 959 ntBASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 AL035410.1-201ENST00000427409 427 ntBASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 MTND2P5-201ENST00000432656 1006 ntBASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 AC097262.1-201ENST00000452559 548 ntBASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 RPL7P49-201ENST00000471402 708 ntBASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 RPL21P13-201ENST00000488305 481 ntBASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 AC114322.1-201ENST00000506771 926 ntBASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 PTK2-220ENST00000520151 573 ntTSL 4 BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 NCAPGP2-201ENST00000557911 754 ntBASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 AC113368.1-201ENST00000603736 382 ntBASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 AC099778.2-201ENST00000610904 211 ntBASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 AL354976.1-201ENST00000613843 387 ntBASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 AC090116.1-201ENST00000615679 446 ntBASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 U73479.1-201ENST00000618062 168 ntBASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 AC107982.1-201ENST00000507171 1300 ntBASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
C9orf40Q8IXQ3 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 USP8P1-201ENST00000494673 3183 ntBASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 Y_RNA.25-201ENST00000362528 102 ntBASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 RNVU1-3-201ENST00000364313 161 ntBASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 RNA5SP72-201ENST00000364442 117 ntBASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 RNVU1-14-201ENST00000384770 164 ntBASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 AC126124.2-201ENST00000413542 321 ntBASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 OR1AA1P-201ENST00000419597 916 ntBASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 MTCYBP24-201ENST00000420387 1106 ntBASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 RPL23AP76-201ENST00000441860 458 ntBASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 AC008264.1-201ENST00000447612 367 ntBASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 RPL5P24-201ENST00000463742 885 ntBASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 RPL23AP67-201ENST00000465341 474 ntBASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 MTCO3P44-201ENST00000510977 541 ntBASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 AC008837.2-201ENST00000513076 418 ntBASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 RN7SKP31-201ENST00000516354 278 ntBASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 AC107934.2-201ENST00000518653 310 ntBASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 AC008127.2-201ENST00000549925 1075 ntBASIC3.12□□□□□ -1.91
C9orf40Q8IXQ3 AC011611.1-201ENST00000552179 197 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms