Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 MTND2P16-201ENST00000419987 799 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC71Q8IV32 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC71Q8IV32 AC006989.1-201ENST00000427212 131 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 USP9YP11-201ENST00000427537 717 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 RPL23AP76-201ENST00000441860 458 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC3.36□□□□□ -1.87
CCDC71Q8IV32 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.36□□□□□ -1.87
CCDC71Q8IV32 AC006480.1-201ENST00000449887 378 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 PPIAP3-201ENST00000450588 505 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 UBDP1-202ENST00000457888 382 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC71Q8IV32 AC146507.1-201ENST00000468335 354 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC71Q8IV32 AC013828.1-201ENST00000481845 158 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC71Q8IV32 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC71Q8IV32 AC074250.1-201ENST00000511117 192 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC71Q8IV32 SNORA70.24-201ENST00000517233 118 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC71Q8IV32 ZNF705CP-201ENST00000530515 889 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 OR5D17P-201ENST00000531492 978 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 OR8L1P-201ENST00000534005 955 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 AC008011.1-201ENST00000545989 227 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 AC090502.2-201ENST00000549267 280 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.36□□□□□ -1.87
CCDC71Q8IV32 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC71Q8IV32 ZNF192P1-203ENST00000565888 810 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC71Q8IV32 YWHAQP7-201ENST00000603536 658 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 AC092354.2-201ENST00000607786 514 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 AC063944.3-201ENST00000609969 533 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 AC099778.2-201ENST00000610904 211 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC71Q8IV32 AC109809.1-201ENST00000619665 545 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 MIR7153-201ENST00000637758 57 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.36□□□□□ -1.87
CCDC71Q8IV32 AC119674.1-207ENST00000641355 633 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 AC092326.2-201ENST00000624772 1561 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 AC107982.1-201ENST00000507171 1300 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.36□□□□□ -1.87
CCDC71Q8IV32 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC71Q8IV32 ZNF826P-207ENST00000622273 1910 ntBASIC3.36□□□□□ -1.87
CCDC71Q8IV32 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCDC71Q8IV32 NMD3P1-201ENST00000439704 1488 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 AC007656.2-201ENST00000624902 4547 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 RNA5SP72-201ENST00000364442 117 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 SNORA9-201ENST00000384215 133 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 MIR491-201ENST00000384877 84 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 MIR218-2-201ENST00000385006 110 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 MIR483-201ENST00000385070 76 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 RNA5SP424-201ENST00000390988 115 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 AL590084.1-201ENST00000407885 387 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 RNA5SP80-201ENST00000410475 111 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 AC245052.5-201ENST00000416320 649 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 RPL22P18-201ENST00000417197 377 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 SETD6P1-201ENST00000444575 317 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 MTCO1P48-201ENST00000448024 1096 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 CYCSP35-201ENST00000451978 304 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 TRBV26-201ENST00000456572 344 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 USP9YP25-201ENST00000457708 443 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 snoU13.24-201ENST00000458998 104 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 AC010401.1-201ENST00000463867 348 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 AP002884.2-201ENST00000471647 395 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 MTCYBP37-201ENST00000510642 1133 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 RNA5SP164-201ENST00000516533 110 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 OR4A45P-201ENST00000529954 901 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 AC023050.2-201ENST00000544968 387 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 AC092470.1-201ENST00000546187 132 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 NBEAP1-201ENST00000554452 979 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 TGIF1P1-201ENST00000558095 802 ntBASIC3.35□□□□□ -1.87
CCDC71Q8IV32 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.35□□□□□ -1.87
CCDC71Q8IV32 AC234772.3-201ENST00000602277 528 ntBASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms