Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PRPF39Q86UA1 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
PRPF39Q86UA1 RPL7P52-201ENST00000449200 742 ntBASIC3.91□□□□□ -1.78
PRPF39Q86UA1 NECAP1P2-201ENST00000455668 727 ntBASIC3.91□□□□□ -1.78
PRPF39Q86UA1 CEACAMP4-201ENST00000457676 421 ntBASIC3.91□□□□□ -1.78
PRPF39Q86UA1 ANK3-207ENST00000460468 677 ntTSL 3 BASIC3.91□□□□□ -1.78
PRPF39Q86UA1 AP001992.1-205ENST00000462248 379 ntBASIC3.91□□□□□ -1.78
PRPF39Q86UA1 AC097493.1-201ENST00000463958 372 ntBASIC3.91□□□□□ -1.78
PRPF39Q86UA1 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.91□□□□□ -1.78
PRPF39Q86UA1 RNU6-1095P-201ENST00000516148 108 ntBASIC3.91□□□□□ -1.78
PRPF39Q86UA1 SNORA70.14-201ENST00000516205 110 ntBASIC3.91□□□□□ -1.78
PRPF39Q86UA1 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRPF39Q86UA1 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PRPF39Q86UA1 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.91□□□□□ -1.78
PRPF39Q86UA1 AC018630.1-201ENST00000541376 925 ntBASIC3.91□□□□□ -1.78
PRPF39Q86UA1 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.91□□□□□ -1.78
PRPF39Q86UA1 NBEAP1-201ENST00000554452 979 ntBASIC3.91□□□□□ -1.78
PRPF39Q86UA1 MTND4P33-201ENST00000556706 766 ntBASIC3.91□□□□□ -1.78
PRPF39Q86UA1 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.91□□□□□ -1.78
PRPF39Q86UA1 AC105148.1-201ENST00000604961 409 ntBASIC3.91□□□□□ -1.78
PRPF39Q86UA1 AC080013.3-201ENST00000606839 578 ntBASIC3.91□□□□□ -1.78
PRPF39Q86UA1 AC007349.4-201ENST00000608114 532 ntBASIC3.91□□□□□ -1.78
PRPF39Q86UA1 AC090425.2-201ENST00000608818 501 ntBASIC3.91□□□□□ -1.78
PRPF39Q86UA1 AC245297.2-201ENST00000610119 565 ntBASIC3.91□□□□□ -1.78
PRPF39Q86UA1 AL121772.2-201ENST00000614331 297 ntBASIC3.91□□□□□ -1.78
PRPF39Q86UA1 AL356585.4-201ENST00000623078 1229 ntBASIC3.91□□□□□ -1.78
PRPF39Q86UA1 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.91□□□□□ -1.78
PRPF39Q86UA1 AC012442.3-202ENST00000636742 206 ntBASIC3.91□□□□□ -1.78
PRPF39Q86UA1 OR4G11P-202ENST00000642116 1414 ntBASIC3.91□□□□□ -1.78
PRPF39Q86UA1 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
PRPF39Q86UA1 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
PRPF39Q86UA1 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.91□□□□□ -1.78
PRPF39Q86UA1 AL672296.1-201ENST00000427780 2158 ntBASIC3.9□□□□□ -1.78
PRPF39Q86UA1 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.9□□□□□ -1.78
PRPF39Q86UA1 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
PRPF39Q86UA1 MTND5P24-201ENST00000438892 1767 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PRPF39Q86UA1 RNU6-28P-201ENST00000362378 107 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 DEFB109C-201ENST00000382575 264 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 DEFB109B-201ENST00000382656 264 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 U1.1-201ENST00000384101 164 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 CYCSP45-201ENST00000402289 315 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 HMGB1P17-201ENST00000403495 628 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.9□□□□□ -1.79
PRPF39Q86UA1 RNU2-47P-201ENST00000410649 186 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 RAB9AP3-201ENST00000412737 573 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
PRPF39Q86UA1 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.9□□□□□ -1.79
PRPF39Q86UA1 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.9□□□□□ -1.79
PRPF39Q86UA1 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.9□□□□□ -1.79
PRPF39Q86UA1 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PRPF39Q86UA1 MTCO2P5-201ENST00000422621 426 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 AL139247.1-201ENST00000422768 325 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.9□□□□□ -1.79
PRPF39Q86UA1 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PRPF39Q86UA1 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC3.9□□□□□ -1.79
PRPF39Q86UA1 RPS25P9-201ENST00000435591 252 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 COX7BP2-201ENST00000437976 242 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.9□□□□□ -1.79
PRPF39Q86UA1 MTND3P1-201ENST00000441336 220 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 RAB9AP1-201ENST00000449393 573 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.9□□□□□ -1.79
PRPF39Q86UA1 ANP32BP2-201ENST00000454525 545 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 Z82190.1-201ENST00000454534 490 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 MTCO3P20-201ENST00000454926 688 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.9□□□□□ -1.79
PRPF39Q86UA1 AC106872.2-201ENST00000494303 480 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 AC096751.1-202ENST00000502691 1067 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.9□□□□□ -1.79
PRPF39Q86UA1 HMGB3P15-201ENST00000507326 574 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 RNU6-150P-201ENST00000516237 95 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 SCARNA14-201ENST00000516903 136 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.9□□□□□ -1.79
PRPF39Q86UA1 MTND2P32-201ENST00000521584 1038 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 IGKV2D-19-201ENST00000523346 262 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PRPF39Q86UA1 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.9□□□□□ -1.79
PRPF39Q86UA1 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.9□□□□□ -1.79
PRPF39Q86UA1 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.9□□□□□ -1.79
PRPF39Q86UA1 VN1R78P-201ENST00000597393 564 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 AC091057.2-201ENST00000602594 792 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 AP001330.4-201ENST00000604350 154 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 AL391497.1-201ENST00000608671 547 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 AC006386.1-201ENST00000619436 415 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 AC015967.1-201ENST00000619893 476 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 AC079684.1-201ENST00000621405 437 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 AL360181.4-201ENST00000621752 134 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 AC091905.1-201ENST00000624400 311 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.79
PRPF39Q86UA1 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
PRPF39Q86UA1 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
PRPF39Q86UA1 PCF11-AS1-201ENST00000602322 1516 ntBASIC3.9□□□□□ -1.79
PRPF39Q86UA1 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.9□□□□□ -1.79
PRPF39Q86UA1 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
PRPF39Q86UA1 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.89□□□□□ -1.79
PRPF39Q86UA1 AC116096.1-201ENST00000566804 2314 ntBASIC3.89□□□□□ -1.79
PRPF39Q86UA1 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
PRPF39Q86UA1 AC106871.1-201ENST00000568324 3102 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms