Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 MIR181B1-201ENST00000385240 110 ntBASIC1.6□□□□□ -2.15
CSMD3Q7Z407 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 AC135628.1-201ENST00000568867 534 ntBASIC1.6□□□□□ -2.15
CSMD3Q7Z407 AL589994.2-201ENST00000621124 579 ntBASIC1.6□□□□□ -2.15
CSMD3Q7Z407 AC002064.3-201ENST00000623448 346 ntBASIC1.6□□□□□ -2.15
CSMD3Q7Z407 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 AL445646.1-201ENST00000431784 216 ntBASIC1.6□□□□□ -2.15
CSMD3Q7Z407 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 TRBV26-201ENST00000456572 344 ntBASIC1.6□□□□□ -2.15
CSMD3Q7Z407 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 AC117529.2-201ENST00000512159 2068 ntBASIC1.6□□□□□ -2.15
CSMD3Q7Z407 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 RPS26P30-201ENST00000443431 335 ntBASIC1.6□□□□□ -2.15
CSMD3Q7Z407 RPL23AP42-201ENST00000471152 471 ntBASIC1.6□□□□□ -2.15
CSMD3Q7Z407 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC1.6□□□□□ -2.15
CSMD3Q7Z407 AL356266.1-201ENST00000623311 483 ntBASIC1.6□□□□□ -2.15
CSMD3Q7Z407 AP003499.2-201ENST00000624100 483 ntBASIC1.6□□□□□ -2.15
CSMD3Q7Z407 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC1.59□□□□□ -2.15
CSMD3Q7Z407 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC1.59□□□□□ -2.15
CSMD3Q7Z407 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.59□□□□□ -2.15
CSMD3Q7Z407 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CSMD3Q7Z407 EIF5P1-201ENST00000400019 1231 ntBASIC1.59□□□□□ -2.15
CSMD3Q7Z407 AC080125.1-201ENST00000414888 684 ntBASIC1.59□□□□□ -2.15
CSMD3Q7Z407 AC107081.1-201ENST00000414975 361 ntBASIC1.59□□□□□ -2.15
CSMD3Q7Z407 RPS15AP6-201ENST00000420703 385 ntBASIC1.59□□□□□ -2.15
CSMD3Q7Z407 RPL7P54-201ENST00000438336 674 ntBASIC1.59□□□□□ -2.15
CSMD3Q7Z407 MTCYBP20-201ENST00000524239 1129 ntBASIC1.59□□□□□ -2.15
CSMD3Q7Z407 AL020991.1-201ENST00000612314 373 ntBASIC1.59□□□□□ -2.15
CSMD3Q7Z407 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
CSMD3Q7Z407 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.59□□□□□ -2.15
CSMD3Q7Z407 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
CSMD3Q7Z407 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC1.59□□□□□ -2.15
CSMD3Q7Z407 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.15
CSMD3Q7Z407 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC1.59□□□□□ -2.15
CSMD3Q7Z407 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC1.59□□□□□ -2.15
CSMD3Q7Z407 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC1.59□□□□□ -2.15
CSMD3Q7Z407 Z99496.1-201ENST00000469424 1477 ntBASIC1.59□□□□□ -2.16
CSMD3Q7Z407 AC095050.2-201ENST00000510748 1458 ntBASIC1.59□□□□□ -2.16
CSMD3Q7Z407 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
CSMD3Q7Z407 MIR378A-201ENST00000362177 66 ntBASIC1.59□□□□□ -2.16
CSMD3Q7Z407 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC1.59□□□□□ -2.16
CSMD3Q7Z407 RPL31P1-201ENST00000398116 372 ntBASIC1.59□□□□□ -2.16
CSMD3Q7Z407 AL355379.1-201ENST00000405542 640 ntBASIC1.59□□□□□ -2.16
CSMD3Q7Z407 FAT1P1-201ENST00000406588 507 ntBASIC1.59□□□□□ -2.16
CSMD3Q7Z407 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
CSMD3Q7Z407 AL158825.1-201ENST00000414735 521 ntBASIC1.59□□□□□ -2.16
CSMD3Q7Z407 HMGB3P23-201ENST00000414981 585 ntBASIC1.59□□□□□ -2.16
CSMD3Q7Z407 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC1.59□□□□□ -2.16
CSMD3Q7Z407 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC1.59□□□□□ -2.16
CSMD3Q7Z407 AC013410.1-201ENST00000436223 1232 ntBASIC1.59□□□□□ -2.16
CSMD3Q7Z407 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.59□□□□□ -2.16
CSMD3Q7Z407 AC072039.1-201ENST00000477611 581 ntBASIC1.59□□□□□ -2.16
CSMD3Q7Z407 KCTD9P5-201ENST00000504141 1170 ntBASIC1.59□□□□□ -2.16
CSMD3Q7Z407 AC117522.2-201ENST00000510049 657 ntBASIC1.59□□□□□ -2.16
CSMD3Q7Z407 RN7SKP96-201ENST00000516948 297 ntBASIC1.59□□□□□ -2.16
CSMD3Q7Z407 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.59□□□□□ -2.16
CSMD3Q7Z407 ARL2BPP2-201ENST00000550907 489 ntBASIC1.59□□□□□ -2.16
CSMD3Q7Z407 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC1.59□□□□□ -2.16
CSMD3Q7Z407 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC1.59□□□□□ -2.16
CSMD3Q7Z407 YWHAEP7-203ENST00000622054 312 ntBASIC1.59□□□□□ -2.16
CSMD3Q7Z407 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
CSMD3Q7Z407 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
CSMD3Q7Z407 AL592437.2-201ENST00000421655 2434 ntBASIC1.59□□□□□ -2.16
CSMD3Q7Z407 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
CSMD3Q7Z407 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
CSMD3Q7Z407 AC011460.1-201ENST00000636268 1834 ntBASIC1.59□□□□□ -2.16
CSMD3Q7Z407 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
CSMD3Q7Z407 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC1.59□□□□□ -2.16
CSMD3Q7Z407 MDM4-202ENST00000367180 547 ntTSL 3 BASIC1.58□□□□□ -2.16
CSMD3Q7Z407 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
CSMD3Q7Z407 AL353729.1-201ENST00000425044 720 ntBASIC1.58□□□□□ -2.16
CSMD3Q7Z407 FABP5P13-201ENST00000452144 328 ntBASIC1.58□□□□□ -2.16
CSMD3Q7Z407 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC1.58□□□□□ -2.16
CSMD3Q7Z407 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC1.58□□□□□ -2.16
CSMD3Q7Z407 MIR4644-201ENST00000579929 84 ntBASIC1.58□□□□□ -2.16
CSMD3Q7Z407 AL137072.1-201ENST00000603444 466 ntBASIC1.58□□□□□ -2.16
CSMD3Q7Z407 AC087468.1-201ENST00000604365 630 ntBASIC1.58□□□□□ -2.16
CSMD3Q7Z407 TTN-204ENST00000360870 18218 ntTSL 5 BASIC1.58□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms