Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 AC010738.1-201ENST00000604970 987 ntBASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 SNORA62.6-201ENST00000606322 83 ntBASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 AL031667.3-201ENST00000620124 655 ntBASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 PCMTD1P7-201ENST00000634506 357 ntBASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
SYNE3Q6ZMZ3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 RNU6-730P-201ENST00000383954 104 ntBASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 RNA5SP424-201ENST00000390988 115 ntBASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 HSPE1P8-201ENST00000406997 288 ntBASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 AL139247.1-201ENST00000422768 325 ntBASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 USP9YP34-201ENST00000453983 808 ntBASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 RN7SL93P-201ENST00000463035 293 ntBASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 PABPC1P3-201ENST00000469174 459 ntBASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 SETP11-201ENST00000473027 690 ntBASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 RPS3AP43-201ENST00000479743 781 ntBASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 AHI1-208ENST00000488690 712 ntTSL 5 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 AC104685.1-201ENST00000502445 371 ntBASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 AC093281.2-201ENST00000510153 597 ntBASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 MTND4LP31-201ENST00000514859 294 ntBASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 RN7SKP209-201ENST00000516888 304 ntBASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 AC092470.1-201ENST00000546187 132 ntBASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 AL451086.1-201ENST00000605596 223 ntBASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 AP003117.2-201ENST00000606010 545 ntBASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 U6.101-201ENST00000637707 76 ntBASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 AC099063.3-201ENST00000642066 185 ntBASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 AC024560.2-201ENST00000507981 1497 ntBASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SYNE3Q6ZMZ3 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
SYNE3Q6ZMZ3 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SYNE3Q6ZMZ3 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
SYNE3Q6ZMZ3 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC4.4□□□□□ -1.7
SYNE3Q6ZMZ3 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 SNORD6-201ENST00000365444 73 ntBASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 EIF5P1-201ENST00000400019 1231 ntBASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 SKINT1L-201ENST00000401057 817 ntBASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 RN7SKP156-201ENST00000410308 342 ntBASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 SNORA57.3-201ENST00000411095 141 ntBASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 AL049610.1-201ENST00000423374 372 ntBASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 AC017083.1-201ENST00000428093 483 ntBASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 AL590103.1-201ENST00000434488 307 ntBASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 UBE2FP3-201ENST00000436366 524 ntBASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 USP9YP7-201ENST00000436723 430 ntBASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 ARPC3P5-201ENST00000448802 534 ntBASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 USP9YP32-201ENST00000452432 430 ntBASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 MTCO3P20-201ENST00000454926 688 ntBASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 MTND3P7-201ENST00000474435 343 ntBASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 AC093853.1-201ENST00000515689 483 ntBASIC4.4□□□□□ -1.71
SYNE3Q6ZMZ3 RNA5SP208-201ENST00000516156 78 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms