Protein–RNA interactions for Protein: Q6TFL3

CCDC171, Coiled-coil domain-containing protein 171, humanhuman

Predictions only

Length 1,326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171Q6TFL3 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CCDC171Q6TFL3 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC3□□□□□ -1.93
CCDC171Q6TFL3 AC004944.1-201ENST00000517807 3059 ntBASIC3□□□□□ -1.93
CCDC171Q6TFL3 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3□□□□□ -1.93
CCDC171Q6TFL3 AL162578.1-201ENST00000406202 378 ntBASIC3□□□□□ -1.93
CCDC171Q6TFL3 AC092638.1-201ENST00000411966 1275 ntBASIC3□□□□□ -1.93
CCDC171Q6TFL3 XKRYP6-201ENST00000440468 1116 ntBASIC3□□□□□ -1.93
CCDC171Q6TFL3 XKRYP3-201ENST00000442113 1116 ntBASIC3□□□□□ -1.93
CCDC171Q6TFL3 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC3□□□□□ -1.93
CCDC171Q6TFL3 HMGN2P16-201ENST00000456802 261 ntBASIC3□□□□□ -1.93
CCDC171Q6TFL3 RPL21P103-201ENST00000479921 488 ntBASIC3□□□□□ -1.93
CCDC171Q6TFL3 AC090071.1-201ENST00000507713 644 ntBASIC3□□□□□ -1.93
CCDC171Q6TFL3 AC017037.2-201ENST00000513850 890 ntBASIC3□□□□□ -1.93
CCDC171Q6TFL3 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3□□□□□ -1.93
CCDC171Q6TFL3 RN7SKP24-201ENST00000515888 284 ntBASIC3□□□□□ -1.93
CCDC171Q6TFL3 AC025881.1-201ENST00000518851 512 ntBASIC3□□□□□ -1.93
CCDC171Q6TFL3 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3□□□□□ -1.93
CCDC171Q6TFL3 HSPE1P20-201ENST00000538133 289 ntBASIC3□□□□□ -1.93
CCDC171Q6TFL3 AC009097.3-201ENST00000563557 1018 ntBASIC3□□□□□ -1.93
CCDC171Q6TFL3 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3□□□□□ -1.93
CCDC171Q6TFL3 AP003117.2-201ENST00000606010 545 ntBASIC3□□□□□ -1.93
CCDC171Q6TFL3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
CCDC171Q6TFL3 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.99□□□□□ -1.93
CCDC171Q6TFL3 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC171Q6TFL3 RNA5SP68-201ENST00000363885 119 ntBASIC2.99□□□□□ -1.93
CCDC171Q6TFL3 RNU6-301P-201ENST00000384277 107 ntBASIC2.99□□□□□ -1.93
CCDC171Q6TFL3 BTF3P9-201ENST00000418784 283 ntBASIC2.99□□□□□ -1.93
CCDC171Q6TFL3 AC023128.2-201ENST00000420880 1223 ntBASIC2.99□□□□□ -1.93
CCDC171Q6TFL3 AL139413.1-201ENST00000421309 217 ntBASIC2.99□□□□□ -1.93
CCDC171Q6TFL3 AC005189.1-201ENST00000431286 310 ntBASIC2.99□□□□□ -1.93
CCDC171Q6TFL3 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.99□□□□□ -1.93
CCDC171Q6TFL3 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC171Q6TFL3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC171Q6TFL3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.99□□□□□ -1.93
CCDC171Q6TFL3 RNA5SP148-201ENST00000516527 94 ntBASIC2.99□□□□□ -1.93
CCDC171Q6TFL3 AC010928.3-201ENST00000587712 541 ntBASIC2.99□□□□□ -1.93
CCDC171Q6TFL3 TPMTP1-201ENST00000592307 737 ntBASIC2.99□□□□□ -1.93
CCDC171Q6TFL3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.99□□□□□ -1.93
CCDC171Q6TFL3 AC091057.2-201ENST00000602594 792 ntBASIC2.99□□□□□ -1.93
CCDC171Q6TFL3 RNA5SP108-201ENST00000605921 117 ntBASIC2.99□□□□□ -1.93
CCDC171Q6TFL3 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC171Q6TFL3 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
CCDC171Q6TFL3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.99□□□□□ -1.93
CCDC171Q6TFL3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC171Q6TFL3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC171Q6TFL3 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CCDC171Q6TFL3 RNA5SP456-201ENST00000364002 114 ntBASIC2.98□□□□□ -1.93
CCDC171Q6TFL3 RNA5SP126-201ENST00000365092 109 ntBASIC2.98□□□□□ -1.93
CCDC171Q6TFL3 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
CCDC171Q6TFL3 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
CCDC171Q6TFL3 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC171Q6TFL3 Z93242.1-201ENST00000427102 353 ntBASIC2.98□□□□□ -1.93
CCDC171Q6TFL3 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC171Q6TFL3 AC069277.2-201ENST00000454211 432 ntBASIC2.98□□□□□ -1.93
CCDC171Q6TFL3 RPL21P104-201ENST00000464143 478 ntBASIC2.98□□□□□ -1.93
CCDC171Q6TFL3 AIG1P1-201ENST00000503376 148 ntBASIC2.98□□□□□ -1.93
CCDC171Q6TFL3 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC2.98□□□□□ -1.93
CCDC171Q6TFL3 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
CCDC171Q6TFL3 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC2.98□□□□□ -1.93
CCDC171Q6TFL3 UBTFL10-201ENST00000528532 562 ntBASIC2.98□□□□□ -1.93
CCDC171Q6TFL3 OR5BN1P-201ENST00000532955 829 ntBASIC2.98□□□□□ -1.93
CCDC171Q6TFL3 CKS1BP1-201ENST00000555221 240 ntBASIC2.98□□□□□ -1.93
CCDC171Q6TFL3 AC090695.1-201ENST00000561269 1222 ntBASIC2.98□□□□□ -1.93
CCDC171Q6TFL3 AL109653.1-201ENST00000603091 248 ntBASIC2.98□□□□□ -1.93
CCDC171Q6TFL3 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.98□□□□□ -1.93
CCDC171Q6TFL3 CUL1P1-201ENST00000509510 2425 ntBASIC2.98□□□□□ -1.93
CCDC171Q6TFL3 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.98□□□□□ -1.93
CCDC171Q6TFL3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.98□□□□□ -1.93
CCDC171Q6TFL3 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC171Q6TFL3 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
CCDC171Q6TFL3 RNU1-109P-201ENST00000383960 147 ntBASIC2.97□□□□□ -1.93
CCDC171Q6TFL3 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC171Q6TFL3 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC171Q6TFL3 MTCO2P17-201ENST00000424336 677 ntBASIC2.97□□□□□ -1.93
CCDC171Q6TFL3 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
CCDC171Q6TFL3 AL513328.1-201ENST00000446460 224 ntBASIC2.97□□□□□ -1.93
CCDC171Q6TFL3 EEF1B2P7-201ENST00000451177 676 ntBASIC2.97□□□□□ -1.93
CCDC171Q6TFL3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.97□□□□□ -1.93
CCDC171Q6TFL3 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC171Q6TFL3 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC171Q6TFL3 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.97□□□□□ -1.93
CCDC171Q6TFL3 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC171Q6TFL3 AC010620.2-201ENST00000600135 313 ntBASIC2.97□□□□□ -1.93
CCDC171Q6TFL3 VN1R81P-201ENST00000602085 372 ntBASIC2.97□□□□□ -1.93
CCDC171Q6TFL3 AC013412.1-201ENST00000610687 192 ntBASIC2.97□□□□□ -1.93
CCDC171Q6TFL3 U4.3-201ENST00000621047 82 ntBASIC2.97□□□□□ -1.93
CCDC171Q6TFL3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.97□□□□□ -1.93
CCDC171Q6TFL3 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.97□□□□□ -1.93
CCDC171Q6TFL3 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC171Q6TFL3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
CCDC171Q6TFL3 ZNF271P-202ENST00000465539 1970 ntBASIC2.97□□□□□ -1.93
CCDC171Q6TFL3 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.96□□□□□ -1.93
CCDC171Q6TFL3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.96□□□□□ -1.93
CCDC171Q6TFL3 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.93
CCDC171Q6TFL3 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.93
CCDC171Q6TFL3 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC2.96□□□□□ -1.93
CCDC171Q6TFL3 AL445529.1-201ENST00000398713 389 ntBASIC2.96□□□□□ -1.93
CCDC171Q6TFL3 SEPT7P2-202ENST00000398921 823 ntBASIC2.96□□□□□ -1.93
CCDC171Q6TFL3 AL356057.1-202ENST00000402263 756 ntBASIC2.96□□□□□ -1.93
CCDC171Q6TFL3 RNA5SP181-201ENST00000410246 98 ntBASIC2.96□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms