Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 AC006116.7-201ENST00000590141 756 ntBASIC3.35□□□□□ -1.87
CDC42BPAQ5VT25 TPMTP1-201ENST00000592307 737 ntBASIC3.35□□□□□ -1.87
CDC42BPAQ5VT25 AC017076.1-201ENST00000607613 578 ntBASIC3.35□□□□□ -1.87
CDC42BPAQ5VT25 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.35□□□□□ -1.87
CDC42BPAQ5VT25 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CDC42BPAQ5VT25 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.34□□□□□ -1.87
CDC42BPAQ5VT25 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
CDC42BPAQ5VT25 AC009487.2-201ENST00000420969 6821 ntBASIC3.34□□□□□ -1.87
CDC42BPAQ5VT25 AC007536.1-201ENST00000533382 349 ntBASIC3.34□□□□□ -1.87
CDC42BPAQ5VT25 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC3.34□□□□□ -1.87
CDC42BPAQ5VT25 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.34□□□□□ -1.87
CDC42BPAQ5VT25 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC3.34□□□□□ -1.87
CDC42BPAQ5VT25 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CDC42BPAQ5VT25 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
CDC42BPAQ5VT25 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDC42BPAQ5VT25 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDC42BPAQ5VT25 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.33□□□□□ -1.88
CDC42BPAQ5VT25 HMGB1P18-201ENST00000438801 619 ntBASIC3.33□□□□□ -1.88
CDC42BPAQ5VT25 RN7SL499P-201ENST00000481141 276 ntBASIC3.33□□□□□ -1.88
CDC42BPAQ5VT25 ATP5F1P5-201ENST00000526403 760 ntBASIC3.33□□□□□ -1.88
CDC42BPAQ5VT25 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC3.33□□□□□ -1.88
CDC42BPAQ5VT25 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.33□□□□□ -1.88
CDC42BPAQ5VT25 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CDC42BPAQ5VT25 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
CDC42BPAQ5VT25 AC022336.2-201ENST00000568966 2538 ntBASIC3.33□□□□□ -1.88
CDC42BPAQ5VT25 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.33□□□□□ -1.88
CDC42BPAQ5VT25 AL354719.1-201ENST00000406535 843 ntBASIC3.33□□□□□ -1.88
CDC42BPAQ5VT25 RNA5SP239-201ENST00000410218 129 ntBASIC3.33□□□□□ -1.88
CDC42BPAQ5VT25 VTA1P1-201ENST00000414044 866 ntBASIC3.33□□□□□ -1.88
CDC42BPAQ5VT25 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.33□□□□□ -1.88
CDC42BPAQ5VT25 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.33□□□□□ -1.88
CDC42BPAQ5VT25 AL358913.1-201ENST00000554342 121 ntBASIC3.33□□□□□ -1.88
CDC42BPAQ5VT25 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.33□□□□□ -1.88
CDC42BPAQ5VT25 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC3.33□□□□□ -1.88
CDC42BPAQ5VT25 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.33□□□□□ -1.88
CDC42BPAQ5VT25 MIR219B-201ENST00000637023 88 ntBASIC3.33□□□□□ -1.88
CDC42BPAQ5VT25 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CDC42BPAQ5VT25 RNA5SP99-201ENST00000364020 114 ntBASIC3.32□□□□□ -1.88
CDC42BPAQ5VT25 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.32□□□□□ -1.88
CDC42BPAQ5VT25 SNORA17.3-201ENST00000391159 129 ntBASIC3.32□□□□□ -1.88
CDC42BPAQ5VT25 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.32□□□□□ -1.88
CDC42BPAQ5VT25 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.32□□□□□ -1.88
CDC42BPAQ5VT25 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.32□□□□□ -1.88
CDC42BPAQ5VT25 RNA5SP458-201ENST00000516188 119 ntBASIC3.32□□□□□ -1.88
CDC42BPAQ5VT25 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.32□□□□□ -1.88
CDC42BPAQ5VT25 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.32□□□□□ -1.88
CDC42BPAQ5VT25 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDC42BPAQ5VT25 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.31□□□□□ -1.88
CDC42BPAQ5VT25 AL512646.1-201ENST00000269395 1077 ntBASIC3.31□□□□□ -1.88
CDC42BPAQ5VT25 XIAPP3-201ENST00000312918 795 ntBASIC3.31□□□□□ -1.88
CDC42BPAQ5VT25 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDC42BPAQ5VT25 SNORA80E-201ENST00000384744 137 ntBASIC3.31□□□□□ -1.88
CDC42BPAQ5VT25 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC3.31□□□□□ -1.88
CDC42BPAQ5VT25 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.31□□□□□ -1.88
CDC42BPAQ5VT25 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CDC42BPAQ5VT25 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.31□□□□□ -1.88
CDC42BPAQ5VT25 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.31□□□□□ -1.88
CDC42BPAQ5VT25 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.31□□□□□ -1.88
CDC42BPAQ5VT25 AC084035.1-201ENST00000634543 607 ntBASIC3.31□□□□□ -1.88
CDC42BPAQ5VT25 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDC42BPAQ5VT25 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDC42BPAQ5VT25 U8.8-201ENST00000365399 135 ntBASIC3.3□□□□□ -1.88
CDC42BPAQ5VT25 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.3□□□□□ -1.88
CDC42BPAQ5VT25 AC093591.3-201ENST00000634516 308 ntBASIC3.3□□□□□ -1.88
CDC42BPAQ5VT25 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CDC42BPAQ5VT25 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CDC42BPAQ5VT25 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CDC42BPAQ5VT25 CDC27P2-201ENST00000425026 1922 ntBASIC3.3□□□□□ -1.88
CDC42BPAQ5VT25 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDC42BPAQ5VT25 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDC42BPAQ5VT25 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDC42BPAQ5VT25 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.3□□□□□ -1.88
CDC42BPAQ5VT25 AADACP1-206ENST00000561502 1193 ntBASIC3.3□□□□□ -1.88
CDC42BPAQ5VT25 MTCYBP28-201ENST00000566728 1132 ntBASIC3.3□□□□□ -1.88
CDC42BPAQ5VT25 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.3□□□□□ -1.88
CDC42BPAQ5VT25 AC104237.2-201ENST00000612456 443 ntBASIC3.3□□□□□ -1.88
CDC42BPAQ5VT25 AC093775.1-201ENST00000624154 1868 ntBASIC3.29□□□□□ -1.88
CDC42BPAQ5VT25 AC007390.1-201ENST00000415722 356 ntBASIC3.29□□□□□ -1.88
CDC42BPAQ5VT25 MORF4L1P6-201ENST00000418771 268 ntBASIC3.29□□□□□ -1.88
CDC42BPAQ5VT25 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.29□□□□□ -1.88
CDC42BPAQ5VT25 AC116337.1-201ENST00000509680 687 ntBASIC3.29□□□□□ -1.88
CDC42BPAQ5VT25 AC044913.1-201ENST00000557200 430 ntBASIC3.29□□□□□ -1.88
CDC42BPAQ5VT25 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CDC42BPAQ5VT25 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CDC42BPAQ5VT25 HSPA8P4-201ENST00000511877 1920 ntBASIC3.28□□□□□ -1.88
CDC42BPAQ5VT25 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
CDC42BPAQ5VT25 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CDC42BPAQ5VT25 SNORA11.4-201ENST00000408823 129 ntBASIC3.28□□□□□ -1.88
CDC42BPAQ5VT25 RNU2-22P-201ENST00000411266 212 ntBASIC3.28□□□□□ -1.88
CDC42BPAQ5VT25 AC013470.3-201ENST00000420252 1194 ntBASIC3.28□□□□□ -1.88
CDC42BPAQ5VT25 SAR1AP4-201ENST00000429225 591 ntBASIC3.28□□□□□ -1.88
CDC42BPAQ5VT25 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.28□□□□□ -1.88
CDC42BPAQ5VT25 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.28□□□□□ -1.88
CDC42BPAQ5VT25 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.28□□□□□ -1.88
CDC42BPAQ5VT25 AC245517.5-201ENST00000611529 162 ntBASIC3.28□□□□□ -1.88
CDC42BPAQ5VT25 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.28□□□□□ -1.88
CDC42BPAQ5VT25 AC073348.1-201ENST00000623002 331 ntBASIC3.28□□□□□ -1.88
CDC42BPAQ5VT25 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDC42BPAQ5VT25 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CDC42BPAQ5VT25 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms