Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 RPL30P11-201ENST00000495304 339 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 AC002456.2-201ENST00000509356 380 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 RNA5SP519-201ENST00000516480 119 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 RNU6-430P-201ENST00000517078 107 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 AC022878.1-201ENST00000530684 149 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 RPS3AP4-201ENST00000555161 764 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 PARP1P2-201ENST00000556806 195 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 ZNF519P2-201ENST00000557032 169 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 AC011477.5-201ENST00000586571 259 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 TPMTP1-201ENST00000592307 737 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 VN1R79P-201ENST00000593540 513 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 AC090578.1-201ENST00000604955 591 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 AC103710.1-201ENST00000610003 901 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 AC109347.2-201ENST00000610220 349 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 OR52H1-202ENST00000641796 1061 ntBASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
CCDC178Q5BJE1 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 ARF4P3-201ENST00000397387 509 ntBASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 AL583835.1-201ENST00000399570 407 ntBASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 AL031679.1-201ENST00000400616 525 ntBASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 AL049693.1-201ENST00000402760 611 ntBASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 AL160275.2-201ENST00000412010 394 ntBASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 AL133384.1-201ENST00000412744 351 ntBASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 BX295541.1-201ENST00000417774 250 ntBASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 RPL30P16-201ENST00000419341 429 ntBASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 RPL23AP38-201ENST00000423801 469 ntBASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 AC233728.2-201ENST00000425348 757 ntBASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 AC024589.1-201ENST00000512207 263 ntBASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 NRON-201ENST00000517270 370 ntBASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 AC124947.2-202ENST00000552735 133 ntBASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 AL161729.4-201ENST00000604650 476 ntBASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 AL513477.2-201ENST00000607858 568 ntBASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 AL159169.3-201ENST00000608871 561 ntBASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 MIR6810-201ENST00000622701 70 ntBASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 AC008013.2-202ENST00000637965 364 ntBASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
CCDC178Q5BJE1 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC178Q5BJE1 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC178Q5BJE1 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
CCDC178Q5BJE1 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.97□□□□□ -1.61
CCDC178Q5BJE1 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC178Q5BJE1 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.97□□□□□ -1.61
CCDC178Q5BJE1 LARP1BP1-201ENST00000506036 1359 ntBASIC4.97□□□□□ -1.61
CCDC178Q5BJE1 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
CCDC178Q5BJE1 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
CCDC178Q5BJE1 HMGB1P17-201ENST00000403495 628 ntBASIC4.97□□□□□ -1.61
CCDC178Q5BJE1 HDGFP1-201ENST00000405943 252 ntBASIC4.97□□□□□ -1.61
CCDC178Q5BJE1 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.97□□□□□ -1.61
CCDC178Q5BJE1 RNA5SP146-201ENST00000410743 123 ntBASIC4.97□□□□□ -1.61
CCDC178Q5BJE1 SPA17P1-201ENST00000416656 452 ntBASIC4.97□□□□□ -1.61
CCDC178Q5BJE1 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC178Q5BJE1 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.97□□□□□ -1.61
CCDC178Q5BJE1 AL445669.1-201ENST00000426743 755 ntBASIC4.97□□□□□ -1.61
CCDC178Q5BJE1 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC178Q5BJE1 MTND1P2-201ENST00000430604 821 ntBASIC4.97□□□□□ -1.61
CCDC178Q5BJE1 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC178Q5BJE1 AC109583.1-201ENST00000432156 268 ntBASIC4.97□□□□□ -1.61
CCDC178Q5BJE1 AL358934.1-201ENST00000432346 324 ntBASIC4.97□□□□□ -1.61
CCDC178Q5BJE1 AC023347.2-201ENST00000433994 462 ntBASIC4.97□□□□□ -1.61
CCDC178Q5BJE1 RPL7P36-201ENST00000444633 681 ntBASIC4.97□□□□□ -1.61
CCDC178Q5BJE1 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC4.97□□□□□ -1.61
CCDC178Q5BJE1 EEF1A1P1-201ENST00000447052 739 ntBASIC4.97□□□□□ -1.61
CCDC178Q5BJE1 Z99127.3-201ENST00000448158 395 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms