Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 IGKV2D-36-201ENST00000518643 226 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 AC068587.4-201ENST00000533893 186 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 MIR5697-201ENST00000578045 78 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 MIR4307-201ENST00000582802 84 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 OR4G1P-201ENST00000588632 938 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 AC068790.5-201ENST00000602741 355 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 AL606834.2-201ENST00000602954 668 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 AC011451.2-201ENST00000604303 598 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 NDUFA8P1-201ENST00000605525 367 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 AC007684.1-201ENST00000609671 477 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 AC006133.1-201ENST00000617106 264 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 uc_338.13-201ENST00000618243 179 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 AC005086.4-201ENST00000623065 213 ntBASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC4.6□□□□□ -1.67
SLC44A4Q53GD3 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 MIR331-201ENST00000362302 94 ntBASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 RNU1-20P-201ENST00000363314 162 ntBASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 Y_RNA.248-201ENST00000364501 109 ntBASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 RNU5E-5P-201ENST00000365379 116 ntBASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 RNA5SP283-201ENST00000365604 119 ntBASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 RAC1P3-201ENST00000416129 580 ntBASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 RPL31P45-201ENST00000419532 356 ntBASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 OFD1P18Y-201ENST00000420889 959 ntBASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 AC010975.2-201ENST00000427781 588 ntBASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 HSPE1P28-201ENST00000443139 211 ntBASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 AL592447.1-201ENST00000447592 540 ntBASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 AC138853.1-201ENST00000503549 823 ntBASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 MTCO3P44-201ENST00000510977 541 ntBASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 IGLVIV-53-201ENST00000520107 367 ntBASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 MIR3158-1-201ENST00000583596 81 ntBASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 AC007566.2-201ENST00000603642 413 ntBASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 AL139395.1-201ENST00000603662 160 ntBASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 AL390208.1-201ENST00000605885 644 ntBASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 AC080013.4-201ENST00000607624 649 ntBASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 AC004520.1-201ENST00000608362 1413 ntBASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 AL357080.1-201ENST00000617394 239 ntBASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 AL445264.1-201ENST00000621719 171 ntBASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 AC004009.2-201ENST00000623016 728 ntBASIC4.59□□□□□ -1.67
SLC44A4Q53GD3 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
SLC44A4Q53GD3 AC006378.2-201ENST00000623178 2476 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 OR11H5P-202ENST00000641612 1325 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 AC008033.1-201ENST00000216407 1162 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 OR11H4-201ENST00000315409 1082 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 MIR372-201ENST00000362225 67 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 RNU4-91P-201ENST00000364778 135 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 RNU6-348P-201ENST00000384386 107 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 RNU6-769P-201ENST00000384407 104 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 SNORA11F-201ENST00000408237 128 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 RN7SKP266-201ENST00000410232 287 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 RN7SKP33-201ENST00000410942 340 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 EIF4A1P3-201ENST00000411521 244 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 AL356583.2-201ENST00000426536 280 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 PSMA6P3-201ENST00000428242 164 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 AC006946.1-201ENST00000429106 328 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 MTCYBP45-201ENST00000435243 565 ntBASIC4.58□□□□□ -1.68
SLC44A4Q53GD3 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms