Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC092427.1-201ENST00000439177 601 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 MTND2P19-201ENST00000449129 1012 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 RFC5P1-201ENST00000454419 874 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 AL445669.2-201ENST00000454425 421 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 snoU109.4-201ENST00000458953 143 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
RAB40BQ12829 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.05□□□□□ -1.92
RAB40BQ12829 AC006390.1-201ENST00000508068 283 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 MTCO2P32-201ENST00000514865 403 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.05□□□□□ -1.92
RAB40BQ12829 AC093853.1-201ENST00000515689 483 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.05□□□□□ -1.92
RAB40BQ12829 AP001207.2-201ENST00000519490 539 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 AC245166.1-201ENST00000521012 253 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 IGKV2D-19-201ENST00000523346 262 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 AC021451.1-201ENST00000523498 1129 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.05□□□□□ -1.92
RAB40BQ12829 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.05□□□□□ -1.92
RAB40BQ12829 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.05□□□□□ -1.92
RAB40BQ12829 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.05□□□□□ -1.92
RAB40BQ12829 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.05□□□□□ -1.92
RAB40BQ12829 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.05□□□□□ -1.92
RAB40BQ12829 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.05□□□□□ -1.92
RAB40BQ12829 SNORD84-203ENST00000584275 78 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 AC006557.5-201ENST00000603126 811 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 AC012669.1-201ENST00000603209 283 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 AC011468.4-201ENST00000603942 409 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 AL365400.2-201ENST00000605604 902 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 AC090912.3-201ENST00000609775 533 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 AC104763.3-201ENST00000613765 618 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 AC023158.2-201ENST00000614876 543 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 MIR6875-201ENST00000617506 72 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.05□□□□□ -1.92
RAB40BQ12829 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.05□□□□□ -1.92
RAB40BQ12829 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.05□□□□□ -1.92
RAB40BQ12829 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.05□□□□□ -1.92
RAB40BQ12829 AL445984.1-201ENST00000637834 659 ntBASIC3.05□□□□□ -1.92
RAB40BQ12829 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.05□□□□□ -1.92
RAB40BQ12829 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
RAB40BQ12829 CDR1-202ENST00000625883 1485 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RAB40BQ12829 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RAB40BQ12829 RNU6-216P-201ENST00000363282 104 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 RNU1-64P-201ENST00000365443 163 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
RAB40BQ12829 Y_RNA.472-201ENST00000384322 102 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 RPL32P23-201ENST00000397237 405 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 AL445189.1-201ENST00000405722 338 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
RAB40BQ12829 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.04□□□□□ -1.92
RAB40BQ12829 RPL7P2-201ENST00000427639 268 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 USP9YP31-201ENST00000431405 881 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 AL590103.1-201ENST00000434488 307 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 MTCYBP11-201ENST00000447254 1109 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 Z99127.3-201ENST00000448158 395 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 RPL39P6-201ENST00000448289 150 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.04□□□□□ -1.92
RAB40BQ12829 VN1R105P-201ENST00000486595 910 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 AC113420.1-201ENST00000507903 571 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 AC010625.1-201ENST00000511296 403 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 AC010374.2-201ENST00000512933 535 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 RNA5SP217-201ENST00000515959 91 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC3.04□□□□□ -1.92
RAB40BQ12829 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
RAB40BQ12829 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.04□□□□□ -1.92
RAB40BQ12829 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.04□□□□□ -1.92
RAB40BQ12829 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.04□□□□□ -1.92
RAB40BQ12829 AC067852.3-201ENST00000589177 561 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.04□□□□□ -1.92
RAB40BQ12829 AC010738.1-201ENST00000604970 987 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 AL139022.2-201ENST00000606934 443 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 U4.6-201ENST00000621618 127 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 AC120349.2-201ENST00000625002 298 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 AC099654.9-201ENST00000637055 678 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 U6.98-201ENST00000637157 84 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
RAB40BQ12829 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
RAB40BQ12829 AL672296.1-201ENST00000427780 2158 ntBASIC3.04□□□□□ -1.92
RAB40BQ12829 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RAB40BQ12829 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
RAB40BQ12829 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.03□□□□□ -1.92
RAB40BQ12829 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.03□□□□□ -1.92
RAB40BQ12829 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.03□□□□□ -1.92
RAB40BQ12829 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.03□□□□□ -1.92
RAB40BQ12829 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RAB40BQ12829 SNRPEP3-201ENST00000338402 276 ntBASIC3.03□□□□□ -1.92
RAB40BQ12829 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.03□□□□□ -1.92
RAB40BQ12829 RNU6-50P-201ENST00000362356 103 ntBASIC3.03□□□□□ -1.92
RAB40BQ12829 SNORD9-201ENST00000362566 104 ntBASIC3.03□□□□□ -1.92
RAB40BQ12829 DEFB109C-201ENST00000382575 264 ntBASIC3.03□□□□□ -1.92
RAB40BQ12829 DEFB109B-201ENST00000382656 264 ntBASIC3.03□□□□□ -1.92
RAB40BQ12829 RNU6-1074P-201ENST00000383995 104 ntBASIC3.03□□□□□ -1.92
RAB40BQ12829 SNORD51-201ENST00000384320 80 ntBASIC3.03□□□□□ -1.92
RAB40BQ12829 AP000567.1-201ENST00000406413 156 ntBASIC3.03□□□□□ -1.92
RAB40BQ12829 AL450338.1-201ENST00000407987 512 ntBASIC3.03□□□□□ -1.92
RAB40BQ12829 RN7SKP156-201ENST00000410308 342 ntBASIC3.03□□□□□ -1.92
RAB40BQ12829 VN1R51P-201ENST00000411675 945 ntBASIC3.03□□□□□ -1.92
RAB40BQ12829 AC007899.1-201ENST00000412776 775 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms