Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 RNU1-97P-201ENST00000516872 164 ntBASIC1.94□□□□□ -2.1
SSBP1Q04837 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC1.94□□□□□ -2.1
SSBP1Q04837 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC1.94□□□□□ -2.1
SSBP1Q04837 AC010620.2-201ENST00000600135 313 ntBASIC1.94□□□□□ -2.1
SSBP1Q04837 AC103810.6-201ENST00000606708 136 ntBASIC1.94□□□□□ -2.1
SSBP1Q04837 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC1.94□□□□□ -2.1
SSBP1Q04837 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
SSBP1Q04837 MTND5P1-201ENST00000445440 1375 ntBASIC1.94□□□□□ -2.1
SSBP1Q04837 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
SSBP1Q04837 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC1.93□□□□□ -2.1
SSBP1Q04837 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC1.93□□□□□ -2.1
SSBP1Q04837 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
SSBP1Q04837 HSPE1P11-201ENST00000339579 310 ntBASIC1.93□□□□□ -2.1
SSBP1Q04837 COTL1P1-201ENST00000422309 375 ntBASIC1.93□□□□□ -2.1
SSBP1Q04837 RFESDP1-201ENST00000422350 461 ntBASIC1.93□□□□□ -2.1
SSBP1Q04837 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC1.93□□□□□ -2.1
SSBP1Q04837 SUMO1P4-201ENST00000429430 302 ntBASIC1.93□□□□□ -2.1
SSBP1Q04837 AL671855.1-201ENST00000446875 1203 ntBASIC1.93□□□□□ -2.1
SSBP1Q04837 AP000936.2-201ENST00000447151 681 ntBASIC1.93□□□□□ -2.1
SSBP1Q04837 NREP-207ENST00000450761 636 ntAPPRIS P1 TSL 4 BASIC1.93□□□□□ -2.1
SSBP1Q04837 NECAP1P2-201ENST00000455668 727 ntBASIC1.93□□□□□ -2.1
SSBP1Q04837 AC025033.1-201ENST00000463883 194 ntBASIC1.93□□□□□ -2.1
SSBP1Q04837 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC1.93□□□□□ -2.1
SSBP1Q04837 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
SSBP1Q04837 GTF2IP9-201ENST00000502460 301 ntBASIC1.93□□□□□ -2.1
SSBP1Q04837 SNORA31.1-201ENST00000515993 133 ntBASIC1.93□□□□□ -2.1
SSBP1Q04837 SNORA31.5-201ENST00000516190 133 ntBASIC1.93□□□□□ -2.1
SSBP1Q04837 HIGD1AP5-201ENST00000529959 259 ntBASIC1.93□□□□□ -2.1
SSBP1Q04837 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC1.93□□□□□ -2.1
SSBP1Q04837 ERP27-202ENST00000540097 993 ntTSL 2 BASIC1.93□□□□□ -2.1
SSBP1Q04837 MIR4325-201ENST00000583049 90 ntBASIC1.93□□□□□ -2.1
SSBP1Q04837 MIR3158-1-201ENST00000583596 81 ntBASIC1.93□□□□□ -2.1
SSBP1Q04837 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC1.93□□□□□ -2.1
SSBP1Q04837 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC1.93□□□□□ -2.1
SSBP1Q04837 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC1.93□□□□□ -2.1
SSBP1Q04837 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC1.93□□□□□ -2.1
SSBP1Q04837 MIR8057-201ENST00000620957 69 ntBASIC1.93□□□□□ -2.1
SSBP1Q04837 CR392039.4-201ENST00000624968 501 ntBASIC1.93□□□□□ -2.1
SSBP1Q04837 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
SSBP1Q04837 SNORA51.2-201ENST00000364595 132 ntBASIC1.92□□□□□ -2.1
SSBP1Q04837 OR5H15-201ENST00000383696 930 ntBASIC1.92□□□□□ -2.1
SSBP1Q04837 MIR518C-201ENST00000384822 101 ntBASIC1.92□□□□□ -2.1
SSBP1Q04837 ARF4P3-201ENST00000397387 509 ntBASIC1.92□□□□□ -2.1
SSBP1Q04837 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC1.92□□□□□ -2.1
SSBP1Q04837 TOMM22P1-201ENST00000418578 312 ntBASIC1.92□□□□□ -2.1
SSBP1Q04837 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC1.92□□□□□ -2.1
SSBP1Q04837 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC1.92□□□□□ -2.1
SSBP1Q04837 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC1.92□□□□□ -2.1
SSBP1Q04837 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.92□□□□□ -2.1
SSBP1Q04837 RPS15AP28-201ENST00000435088 386 ntBASIC1.92□□□□□ -2.1
SSBP1Q04837 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC1.92□□□□□ -2.1
SSBP1Q04837 NANOGNBP1-201ENST00000448444 480 ntBASIC1.92□□□□□ -2.1
SSBP1Q04837 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC1.92□□□□□ -2.1
SSBP1Q04837 RNU7-27P-201ENST00000459281 62 ntBASIC1.92□□□□□ -2.1
SSBP1Q04837 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC1.92□□□□□ -2.1
SSBP1Q04837 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC1.92□□□□□ -2.1
SSBP1Q04837 AC093755.1-201ENST00000512950 1023 ntBASIC1.92□□□□□ -2.1
SSBP1Q04837 AC034159.1-201ENST00000513885 583 ntBASIC1.92□□□□□ -2.1
SSBP1Q04837 AC025755.1-201ENST00000521306 278 ntBASIC1.92□□□□□ -2.1
SSBP1Q04837 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC1.92□□□□□ -2.1
SSBP1Q04837 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.92□□□□□ -2.1
SSBP1Q04837 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC1.92□□□□□ -2.1
SSBP1Q04837 OR6C73P-201ENST00000546432 358 ntBASIC1.92□□□□□ -2.1
SSBP1Q04837 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
SSBP1Q04837 CFL2-206ENST00000556161 546 ntTSL 4 BASIC1.92□□□□□ -2.1
SSBP1Q04837 AC009163.5-201ENST00000575421 637 ntBASIC1.92□□□□□ -2.1
SSBP1Q04837 AC007448.1-201ENST00000582714 234 ntBASIC1.92□□□□□ -2.1
SSBP1Q04837 SNRPGP15-201ENST00000600149 222 ntBASIC1.92□□□□□ -2.1
SSBP1Q04837 AC006023.1-201ENST00000603944 259 ntBASIC1.92□□□□□ -2.1
SSBP1Q04837 AC012213.4-201ENST00000606457 354 ntBASIC1.92□□□□□ -2.1
SSBP1Q04837 AL390240.1-201ENST00000612950 384 ntBASIC1.92□□□□□ -2.1
SSBP1Q04837 AC012314.7-201ENST00000619693 93 ntBASIC1.92□□□□□ -2.1
SSBP1Q04837 AC009831.4-201ENST00000620744 325 ntBASIC1.92□□□□□ -2.1
SSBP1Q04837 AL160394.1-201ENST00000624765 724 ntBASIC1.92□□□□□ -2.1
SSBP1Q04837 AC093591.3-201ENST00000634516 308 ntBASIC1.92□□□□□ -2.1
SSBP1Q04837 AP000553.5-201ENST00000641933 54 ntBASIC1.92□□□□□ -2.1
SSBP1Q04837 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
SSBP1Q04837 OFD1P5Y-201ENST00000447585 2590 ntBASIC1.92□□□□□ -2.1
SSBP1Q04837 AC093536.2-201ENST00000565257 1406 ntBASIC1.91□□□□□ -2.1
SSBP1Q04837 AC073055.1-201ENST00000456901 1621 ntBASIC1.91□□□□□ -2.1
SSBP1Q04837 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.91□□□□□ -2.1
SSBP1Q04837 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SSBP1Q04837 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
SSBP1Q04837 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
SSBP1Q04837 RNU1-85P-201ENST00000364127 164 ntBASIC1.91□□□□□ -2.1
SSBP1Q04837 SNORA44-201ENST00000384584 132 ntBASIC1.91□□□□□ -2.1
SSBP1Q04837 MIR34B-201ENST00000385076 84 ntBASIC1.91□□□□□ -2.1
SSBP1Q04837 RNU6ATAC10P-201ENST00000408635 111 ntBASIC1.91□□□□□ -2.1
SSBP1Q04837 AC244098.2-201ENST00000422068 99 ntBASIC1.91□□□□□ -2.1
SSBP1Q04837 USP9YP36-201ENST00000424581 829 ntBASIC1.91□□□□□ -2.1
SSBP1Q04837 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC1.91□□□□□ -2.1
SSBP1Q04837 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SSBP1Q04837 MORF4L1P7-201ENST00000426038 703 ntBASIC1.91□□□□□ -2.1
SSBP1Q04837 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC1.91□□□□□ -2.1
SSBP1Q04837 CKS1BP5-201ENST00000434172 273 ntBASIC1.91□□□□□ -2.1
SSBP1Q04837 RPL23AP33-201ENST00000442301 452 ntBASIC1.91□□□□□ -2.1
SSBP1Q04837 RPL6P5-201ENST00000445678 828 ntBASIC1.91□□□□□ -2.1
SSBP1Q04837 UBE2V2P4-201ENST00000447495 259 ntBASIC1.91□□□□□ -2.1
SSBP1Q04837 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
SSBP1Q04837 NF1P3-201ENST00000457709 450 ntBASIC1.91□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms