Protein–RNA interactions for Protein: Q02223

TNFRSF17, Tumor necrosis factor receptor superfamily member 17, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17Q02223 AL451074.6-201ENST00000608512 729 ntBASIC3.23□□□□□ -1.89
TNFRSF17Q02223 AC008083.4-201ENST00000615076 444 ntBASIC3.23□□□□□ -1.89
TNFRSF17Q02223 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC3.23□□□□□ -1.89
TNFRSF17Q02223 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.23□□□□□ -1.89
TNFRSF17Q02223 AC004777.1-201ENST00000624317 287 ntBASIC3.23□□□□□ -1.89
TNFRSF17Q02223 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.23□□□□□ -1.89
TNFRSF17Q02223 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.23□□□□□ -1.89
TNFRSF17Q02223 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TNFRSF17Q02223 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
TNFRSF17Q02223 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.22□□□□□ -1.89
TNFRSF17Q02223 CUL1P1-201ENST00000509510 2425 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 AL356274.2-201ENST00000624379 3752 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 RNA5SP387-201ENST00000364226 106 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
TNFRSF17Q02223 RNU6-207P-201ENST00000384137 107 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 SAR1AP2-201ENST00000392696 594 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 MCTS2P-201ENST00000394552 546 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 RNA5SP44-201ENST00000410446 133 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 AC245052.5-201ENST00000416320 649 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.22□□□□□ -1.89
TNFRSF17Q02223 TRIAP1P1-201ENST00000427062 225 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 RPL23AP82-202ENST00000427528 469 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 MTATP6P4-201ENST00000427725 675 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.22□□□□□ -1.89
TNFRSF17Q02223 AP000949.1-201ENST00000438328 629 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 AC000041.1-201ENST00000439655 175 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TNFRSF17Q02223 AC008264.1-201ENST00000447612 367 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 MTCO1P48-201ENST00000448024 1096 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 HMGN1P5-201ENST00000448591 263 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 PDSS1P2-201ENST00000449397 678 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 AC097262.1-201ENST00000452559 548 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.22□□□□□ -1.89
TNFRSF17Q02223 CENPBD1P1-201ENST00000464061 469 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 KLRA1P-201ENST00000503499 986 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 AC112198.1-201ENST00000505369 1220 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 AC091860.1-201ENST00000505723 432 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 FCF1P8-201ENST00000510322 597 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 PHBP14-201ENST00000512887 367 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.22□□□□□ -1.89
TNFRSF17Q02223 SNORA31.1-201ENST00000515993 133 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 RN7SKP157-201ENST00000516174 282 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 SNORA31.5-201ENST00000516190 133 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 AP003355.1-201ENST00000518956 587 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 MTND1P36-201ENST00000522384 936 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 AL139174.1-201ENST00000531489 886 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.22□□□□□ -1.89
TNFRSF17Q02223 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.22□□□□□ -1.89
TNFRSF17Q02223 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.22□□□□□ -1.89
TNFRSF17Q02223 MTCYBP27-201ENST00000555160 670 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.22□□□□□ -1.89
TNFRSF17Q02223 AP005205.1-201ENST00000563503 508 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC3.22□□□□□ -1.89
TNFRSF17Q02223 FAM60BP-201ENST00000578364 658 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.22□□□□□ -1.89
TNFRSF17Q02223 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.22□□□□□ -1.89
TNFRSF17Q02223 AC106028.5-201ENST00000610332 395 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
TNFRSF17Q02223 AC018926.1-201ENST00000616335 435 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 AC018816.2-201ENST00000621460 353 ntBASIC3.22□□□□□ -1.89
TNFRSF17Q02223 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
TNFRSF17Q02223 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
TNFRSF17Q02223 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
TNFRSF17Q02223 AC058791.1-201ENST00000608412 3198 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 RNA5SP197-201ENST00000363357 119 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TNFRSF17Q02223 AL603865.2-201ENST00000401679 213 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 AL355615.1-201ENST00000406187 641 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 AC126124.2-201ENST00000413542 321 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.21□□□□□ -1.9
TNFRSF17Q02223 BX842559.1-201ENST00000419615 532 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 HSPE1P1-201ENST00000421494 318 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 AC069157.1-201ENST00000421749 137 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 USP9YP36-201ENST00000424581 829 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.21□□□□□ -1.9
TNFRSF17Q02223 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC3.21□□□□□ -1.9
TNFRSF17Q02223 AC140076.1-201ENST00000449897 361 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 RPS17P11-201ENST00000474297 293 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC3.21□□□□□ -1.9
TNFRSF17Q02223 AC006483.1-201ENST00000487308 313 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 BOLA3P3-201ENST00000505182 232 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 AC006390.1-201ENST00000508068 283 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 RNU6-27P-201ENST00000516146 107 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.21□□□□□ -1.9
TNFRSF17Q02223 AP001317.1-201ENST00000531194 960 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 AC092451.2-201ENST00000538746 658 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 AP001542.2-201ENST00000593141 364 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 AC012669.1-201ENST00000603209 283 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 RPAP2P1-201ENST00000603626 1168 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 AC092354.2-201ENST00000607786 514 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 AC009570.1-201ENST00000609599 745 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC3.21□□□□□ -1.9
TNFRSF17Q02223 AC244100.1-202ENST00000621554 382 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 AC090897.3-201ENST00000636973 1157 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 AC017071.1-201ENST00000564407 2204 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
TNFRSF17Q02223 AL049781.1-201ENST00000623195 3585 ntBASIC3.21□□□□□ -1.9
TNFRSF17Q02223 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
TNFRSF17Q02223 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 144 ms