Protein–RNA interactions for Protein: Q01118

SCN7A, Sodium channel protein type 7 subunit alpha, humanhuman

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7AQ01118 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.82□□□□□ -1.96
SCN7AQ01118 SAR1AP4-201ENST00000429225 591 ntBASIC2.82□□□□□ -1.96
SCN7AQ01118 RPS15AP28-201ENST00000435088 386 ntBASIC2.82□□□□□ -1.96
SCN7AQ01118 AC239798.3-201ENST00000454459 408 ntBASIC2.82□□□□□ -1.96
SCN7AQ01118 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.82□□□□□ -1.96
SCN7AQ01118 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.82□□□□□ -1.96
SCN7AQ01118 RNU6-548P-201ENST00000517083 115 ntBASIC2.82□□□□□ -1.96
SCN7AQ01118 AP003467.2-201ENST00000520175 319 ntBASIC2.82□□□□□ -1.96
SCN7AQ01118 AC105137.2-201ENST00000569073 466 ntBASIC2.82□□□□□ -1.96
SCN7AQ01118 AP001521.1-201ENST00000609150 300 ntBASIC2.82□□□□□ -1.96
SCN7AQ01118 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
SCN7AQ01118 RNU6-178P-201ENST00000384631 104 ntBASIC2.82□□□□□ -1.96
SCN7AQ01118 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC2.82□□□□□ -1.96
SCN7AQ01118 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
SCN7AQ01118 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.82□□□□□ -1.96
SCN7AQ01118 HMGN2P23-201ENST00000456759 269 ntBASIC2.82□□□□□ -1.96
SCN7AQ01118 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.82□□□□□ -1.96
SCN7AQ01118 AC018630.1-201ENST00000541376 925 ntBASIC2.82□□□□□ -1.96
SCN7AQ01118 AC135628.1-201ENST00000568867 534 ntBASIC2.82□□□□□ -1.96
SCN7AQ01118 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.81□□□□□ -1.96
SCN7AQ01118 AL133412.1-201ENST00000380194 2992 ntBASIC2.81□□□□□ -1.96
SCN7AQ01118 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.81□□□□□ -1.96
SCN7AQ01118 OR4G2P-202ENST00000641004 1759 ntBASIC2.81□□□□□ -1.96
SCN7AQ01118 Y_RNA.4-201ENST00000362333 112 ntBASIC2.81□□□□□ -1.96
SCN7AQ01118 RNA5SP99-201ENST00000364020 114 ntBASIC2.81□□□□□ -1.96
SCN7AQ01118 SNORA62.2-201ENST00000364672 152 ntBASIC2.81□□□□□ -1.96
SCN7AQ01118 RNA5SP88-201ENST00000365560 109 ntBASIC2.81□□□□□ -1.96
SCN7AQ01118 RNU6-328P-201ENST00000390887 106 ntBASIC2.81□□□□□ -1.96
SCN7AQ01118 ARF4P2-201ENST00000430209 526 ntBASIC2.81□□□□□ -1.96
SCN7AQ01118 TRBV1-201ENST00000476502 284 ntBASIC2.81□□□□□ -1.96
SCN7AQ01118 OR11H5P-201ENST00000554039 926 ntBASIC2.81□□□□□ -1.96
SCN7AQ01118 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC2.81□□□□□ -1.96
SCN7AQ01118 AC009831.4-201ENST00000620744 325 ntBASIC2.81□□□□□ -1.96
SCN7AQ01118 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC2.81□□□□□ -1.96
SCN7AQ01118 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.81□□□□□ -1.96
SCN7AQ01118 AC008432.1-201ENST00000615912 1320 ntBASIC2.81□□□□□ -1.96
SCN7AQ01118 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
SCN7AQ01118 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SCN7AQ01118 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.8□□□□□ -1.96
SCN7AQ01118 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SCN7AQ01118 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.8□□□□□ -1.96
SCN7AQ01118 AC098826.1-201ENST00000433943 471 ntBASIC2.8□□□□□ -1.96
SCN7AQ01118 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.8□□□□□ -1.96
SCN7AQ01118 RPL23AP62-201ENST00000463396 453 ntBASIC2.8□□□□□ -1.96
SCN7AQ01118 SEPT7P6-201ENST00000469999 1143 ntBASIC2.8□□□□□ -1.96
SCN7AQ01118 AC004263.1-201ENST00000479327 332 ntBASIC2.8□□□□□ -1.96
SCN7AQ01118 SCARNA16.3-201ENST00000516595 184 ntBASIC2.8□□□□□ -1.96
SCN7AQ01118 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC2.8□□□□□ -1.96
SCN7AQ01118 OR5BN1P-201ENST00000532955 829 ntBASIC2.8□□□□□ -1.96
SCN7AQ01118 AC007536.1-201ENST00000533382 349 ntBASIC2.8□□□□□ -1.96
SCN7AQ01118 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC2.8□□□□□ -1.96
SCN7AQ01118 AC012182.1-201ENST00000570133 895 ntBASIC2.8□□□□□ -1.96
SCN7AQ01118 AC017076.1-201ENST00000607613 578 ntBASIC2.8□□□□□ -1.96
SCN7AQ01118 AC103710.1-201ENST00000610003 901 ntBASIC2.8□□□□□ -1.96
SCN7AQ01118 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
SCN7AQ01118 AC245100.2-201ENST00000454544 1679 ntBASIC2.8□□□□□ -1.96
SCN7AQ01118 AC022336.2-201ENST00000568966 2538 ntBASIC2.8□□□□□ -1.96
SCN7AQ01118 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
SCN7AQ01118 PHKBP1-201ENST00000450951 1951 ntBASIC2.8□□□□□ -1.96
SCN7AQ01118 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.79□□□□□ -1.96
SCN7AQ01118 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.79□□□□□ -1.96
SCN7AQ01118 RPL31P45-201ENST00000419532 356 ntBASIC2.79□□□□□ -1.96
SCN7AQ01118 NFU1-207ENST00000462320 558 ntTSL 4 BASIC2.79□□□□□ -1.96
SCN7AQ01118 AC021733.2-201ENST00000518830 497 ntBASIC2.79□□□□□ -1.96
SCN7AQ01118 AC023813.4-201ENST00000607580 580 ntBASIC2.79□□□□□ -1.96
SCN7AQ01118 ADAM3A-203ENST00000461344 2157 ntBASIC2.79□□□□□ -1.96
SCN7AQ01118 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
SCN7AQ01118 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
SCN7AQ01118 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SCN7AQ01118 SNORD6-201ENST00000365444 73 ntBASIC2.79□□□□□ -1.96
SCN7AQ01118 DEFA7P-201ENST00000382676 285 ntBASIC2.79□□□□□ -1.96
SCN7AQ01118 MIR221-201ENST00000385135 110 ntBASIC2.79□□□□□ -1.96
SCN7AQ01118 U8.13-201ENST00000390842 128 ntBASIC2.79□□□□□ -1.96
SCN7AQ01118 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.79□□□□□ -1.96
SCN7AQ01118 AC092427.1-202ENST00000430569 476 ntBASIC2.79□□□□□ -1.96
SCN7AQ01118 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC2.79□□□□□ -1.96
SCN7AQ01118 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.79□□□□□ -1.96
SCN7AQ01118 NDUFB4P9-201ENST00000511646 388 ntBASIC2.79□□□□□ -1.96
SCN7AQ01118 HIGD1AP10-201ENST00000527837 282 ntBASIC2.79□□□□□ -1.96
SCN7AQ01118 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC2.79□□□□□ -1.96
SCN7AQ01118 AC010378.1-201ENST00000619270 362 ntBASIC2.79□□□□□ -1.96
SCN7AQ01118 AC073348.1-201ENST00000623002 331 ntBASIC2.79□□□□□ -1.96
SCN7AQ01118 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
SCN7AQ01118 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC2.78□□□□□ -1.96
SCN7AQ01118 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SCN7AQ01118 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.78□□□□□ -1.96
SCN7AQ01118 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC2.78□□□□□ -1.96
SCN7AQ01118 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC2.78□□□□□ -1.96
SCN7AQ01118 MIR142-201ENST00000384835 87 ntBASIC2.78□□□□□ -1.96
SCN7AQ01118 RNU2-2P-201ENST00000410396 191 ntBASIC2.78□□□□□ -1.96
SCN7AQ01118 CKS1BP2-201ENST00000497342 240 ntBASIC2.78□□□□□ -1.96
SCN7AQ01118 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.78□□□□□ -1.96
SCN7AQ01118 RNA5SP200-201ENST00000516360 103 ntBASIC2.78□□□□□ -1.96
SCN7AQ01118 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.78□□□□□ -1.96
SCN7AQ01118 AC023043.3-201ENST00000593113 385 ntBASIC2.78□□□□□ -1.96
SCN7AQ01118 U2.15-201ENST00000611544 191 ntBASIC2.78□□□□□ -1.96
SCN7AQ01118 U2.16-201ENST00000613119 191 ntBASIC2.78□□□□□ -1.96
SCN7AQ01118 U2.12-201ENST00000613778 191 ntBASIC2.78□□□□□ -1.96
SCN7AQ01118 U2.20-201ENST00000613956 192 ntBASIC2.78□□□□□ -1.96
SCN7AQ01118 U2.9-201ENST00000615427 191 ntBASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms