Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC091965.4-201ENST00000607691 587 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 AC092354.2-201ENST00000607786 514 ntBASIC3.4□□□□□ -1.87
CX3CL1P78423 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC3.4□□□□□ -1.87
CX3CL1P78423 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.4□□□□□ -1.87
CX3CL1P78423 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.4□□□□□ -1.87
CX3CL1P78423 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CX3CL1P78423 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC3.4□□□□□ -1.87
CX3CL1P78423 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.4□□□□□ -1.87
CX3CL1P78423 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CX3CL1P78423 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CX3CL1P78423 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.39□□□□□ -1.87
CX3CL1P78423 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CX3CL1P78423 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.39□□□□□ -1.87
CX3CL1P78423 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
CX3CL1P78423 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CX3CL1P78423 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.39□□□□□ -1.87
CX3CL1P78423 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.39□□□□□ -1.87
CX3CL1P78423 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.39□□□□□ -1.87
CX3CL1P78423 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.39□□□□□ -1.87
CX3CL1P78423 AL157700.1-201ENST00000561973 1432 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CX3CL1P78423 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.39□□□□□ -1.87
CX3CL1P78423 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.39□□□□□ -1.87
CX3CL1P78423 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CX3CL1P78423 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CX3CL1P78423 Y_RNA.77-201ENST00000362962 107 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 RN7SKP44-201ENST00000363602 316 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 RNU5F-7P-201ENST00000363696 115 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 RNU1-32P-201ENST00000363937 159 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 MIR3074-201ENST00000384885 81 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 AL583835.1-201ENST00000399570 407 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 Z97055.1-201ENST00000419730 712 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC3.39□□□□□ -1.87
CX3CL1P78423 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.39□□□□□ -1.87
CX3CL1P78423 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC3.39□□□□□ -1.87
CX3CL1P78423 AC109583.1-201ENST00000432156 268 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 AC096638.2-201ENST00000434965 711 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.39□□□□□ -1.87
CX3CL1P78423 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.39□□□□□ -1.87
CX3CL1P78423 KATNBL1P3-201ENST00000443475 909 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 FAM103A2P-201ENST00000444122 354 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 RPL7P36-201ENST00000444633 681 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.39□□□□□ -1.87
CX3CL1P78423 NPM1P49-201ENST00000448027 714 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 AC009961.3-201ENST00000449832 765 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.39□□□□□ -1.87
CX3CL1P78423 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.39□□□□□ -1.87
CX3CL1P78423 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC3.39□□□□□ -1.87
CX3CL1P78423 RN7SL303P-201ENST00000469773 251 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 RN7SL585P-201ENST00000470538 280 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC3.39□□□□□ -1.87
CX3CL1P78423 RPL35P6-201ENST00000490024 372 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 AC104164.2-201ENST00000496953 495 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 PRR16-204ENST00000505123 1298 ntTSL 3 BASIC3.39□□□□□ -1.87
CX3CL1P78423 HMGB1P22-201ENST00000505315 124 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CX3CL1P78423 AL592156.1-201ENST00000508758 304 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.39□□□□□ -1.87
CX3CL1P78423 AC116347.2-201ENST00000514912 523 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 SNORA31.20-201ENST00000517111 133 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.39□□□□□ -1.87
CX3CL1P78423 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.39□□□□□ -1.87
CX3CL1P78423 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC3.39□□□□□ -1.87
CX3CL1P78423 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CX3CL1P78423 MAL2-203ENST00000534619 578 ntTSL 4 BASIC3.39□□□□□ -1.87
CX3CL1P78423 ASB8-204ENST00000536071 568 ntTSL 4 BASIC3.39□□□□□ -1.87
CX3CL1P78423 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.39□□□□□ -1.87
CX3CL1P78423 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.39□□□□□ -1.87
CX3CL1P78423 AC034268.2-201ENST00000571784 482 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 AC006270.2-201ENST00000578523 652 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.39□□□□□ -1.87
CX3CL1P78423 AC015726.1-201ENST00000602353 681 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 AP001981.2-201ENST00000603241 418 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CX3CL1P78423 AL158063.1-201ENST00000615349 536 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 AC009090.3-201ENST00000616553 565 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 MIR7641-1-201ENST00000627518 61 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.39□□□□□ -1.87
CX3CL1P78423 AC093591.3-201ENST00000634516 308 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
CX3CL1P78423 AL158163.1-201ENST00000603915 1649 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CX3CL1P78423 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CX3CL1P78423 AC010733.2-201ENST00000589496 5702 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 AL645937.1-201ENST00000641739 1652 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.39□□□□□ -1.87
CX3CL1P78423 Z82217.1-201ENST00000625157 8149 ntBASIC3.39□□□□□ -1.87
CX3CL1P78423 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CX3CL1P78423 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CX3CL1P78423 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CX3CL1P78423 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CX3CL1P78423 AL121657.1-201ENST00000327215 531 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CX3CL1P78423 RNU6-1155P-201ENST00000363554 107 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 RNA5SP235-201ENST00000365411 114 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 AL138880.1-201ENST00000405824 642 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 RNA5SP36-201ENST00000410197 133 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 RNA5SP239-201ENST00000410218 129 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 RPS7P15-201ENST00000415804 584 ntBASIC3.38□□□□□ -1.87
CX3CL1P78423 RAD23BP2-201ENST00000416003 1207 ntBASIC3.38□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms