Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AC096947.1-201ENST00000603233 470 ntBASIC3.07□□□□□ -1.92
TPM4P67936 AC113368.1-201ENST00000603736 382 ntBASIC3.07□□□□□ -1.92
TPM4P67936 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.07□□□□□ -1.92
TPM4P67936 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TPM4P67936 AC069200.1-201ENST00000609511 323 ntBASIC3.07□□□□□ -1.92
TPM4P67936 U6.105-201ENST00000637379 88 ntBASIC3.07□□□□□ -1.92
TPM4P67936 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.07□□□□□ -1.92
TPM4P67936 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
TPM4P67936 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
TPM4P67936 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
TPM4P67936 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.06□□□□□ -1.92
TPM4P67936 MIR183-201ENST00000384958 110 ntBASIC3.06□□□□□ -1.92
TPM4P67936 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TPM4P67936 RNA5SP38-201ENST00000410750 119 ntBASIC3.06□□□□□ -1.92
TPM4P67936 RNU4-78P-201ENST00000410940 126 ntBASIC3.06□□□□□ -1.92
TPM4P67936 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.06□□□□□ -1.92
TPM4P67936 ZNF734P-201ENST00000419494 1534 ntBASIC3.06□□□□□ -1.92
TPM4P67936 ATG3P1-201ENST00000419507 911 ntBASIC3.06□□□□□ -1.92
TPM4P67936 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.06□□□□□ -1.92
TPM4P67936 RPL36P19-201ENST00000430744 301 ntBASIC3.06□□□□□ -1.92
TPM4P67936 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.06□□□□□ -1.92
TPM4P67936 SLC8A1-AS1-205ENST00000435515 497 ntTSL 3 BASIC3.06□□□□□ -1.92
TPM4P67936 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.06□□□□□ -1.92
TPM4P67936 RPL37P4-201ENST00000448908 268 ntBASIC3.06□□□□□ -1.92
TPM4P67936 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.06□□□□□ -1.92
TPM4P67936 MRPL35P4-201ENST00000453682 566 ntBASIC3.06□□□□□ -1.92
TPM4P67936 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.06□□□□□ -1.92
TPM4P67936 AC006445.1-201ENST00000491925 405 ntBASIC3.06□□□□□ -1.92
TPM4P67936 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TPM4P67936 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.06□□□□□ -1.92
TPM4P67936 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC3.06□□□□□ -1.92
TPM4P67936 AC091826.1-201ENST00000514065 313 ntBASIC3.06□□□□□ -1.92
TPM4P67936 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.06□□□□□ -1.92
TPM4P67936 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.06□□□□□ -1.92
TPM4P67936 AP002404.1-201ENST00000532005 451 ntBASIC3.06□□□□□ -1.92
TPM4P67936 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.06□□□□□ -1.92
TPM4P67936 AC009268.1-201ENST00000561352 1203 ntBASIC3.06□□□□□ -1.92
TPM4P67936 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.06□□□□□ -1.92
TPM4P67936 AL162274.2-201ENST00000614406 332 ntBASIC3.06□□□□□ -1.92
TPM4P67936 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.06□□□□□ -1.92
TPM4P67936 MIR7975-201ENST00000619350 68 ntBASIC3.06□□□□□ -1.92
TPM4P67936 AC092650.2-201ENST00000619984 902 ntBASIC3.06□□□□□ -1.92
TPM4P67936 AC010297.1-201ENST00000623948 149 ntBASIC3.06□□□□□ -1.92
TPM4P67936 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.06□□□□□ -1.92
TPM4P67936 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.06□□□□□ -1.92
TPM4P67936 RNA5SP120-201ENST00000410900 112 ntBASIC3.05□□□□□ -1.92
TPM4P67936 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC3.05□□□□□ -1.92
TPM4P67936 AC069157.1-201ENST00000421749 137 ntBASIC3.05□□□□□ -1.92
TPM4P67936 RPS26P56-201ENST00000444468 240 ntBASIC3.05□□□□□ -1.92
TPM4P67936 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TPM4P67936 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TPM4P67936 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.05□□□□□ -1.92
TPM4P67936 AC008565.1-201ENST00000509046 885 ntBASIC3.05□□□□□ -1.92
TPM4P67936 AC008885.2-201ENST00000509506 930 ntBASIC3.05□□□□□ -1.92
TPM4P67936 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.05□□□□□ -1.92
TPM4P67936 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TPM4P67936 ERHP1-201ENST00000523006 310 ntBASIC3.05□□□□□ -1.92
TPM4P67936 AC010306.1-201ENST00000523223 1117 ntBASIC3.05□□□□□ -1.92
TPM4P67936 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.05□□□□□ -1.92
TPM4P67936 C1DP5-201ENST00000525775 383 ntBASIC3.05□□□□□ -1.92
TPM4P67936 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.05□□□□□ -1.92
TPM4P67936 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.05□□□□□ -1.92
TPM4P67936 AC087481.2-201ENST00000565492 330 ntBASIC3.05□□□□□ -1.92
TPM4P67936 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.05□□□□□ -1.92
TPM4P67936 AC060766.3-201ENST00000591442 263 ntBASIC3.05□□□□□ -1.92
TPM4P67936 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC3.05□□□□□ -1.92
TPM4P67936 RPL23AP88-201ENST00000605759 454 ntBASIC3.05□□□□□ -1.92
TPM4P67936 AC084036.1-201ENST00000609190 508 ntBASIC3.05□□□□□ -1.92
TPM4P67936 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.05□□□□□ -1.92
TPM4P67936 MIR3651-201ENST00000630427 90 ntBASIC3.05□□□□□ -1.92
TPM4P67936 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC3.05□□□□□ -1.92
TPM4P67936 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.05□□□□□ -1.92
TPM4P67936 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
TPM4P67936 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.04□□□□□ -1.92
TPM4P67936 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.04□□□□□ -1.92
TPM4P67936 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TPM4P67936 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC3.04□□□□□ -1.92
TPM4P67936 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.04□□□□□ -1.92
TPM4P67936 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
TPM4P67936 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.04□□□□□ -1.92
TPM4P67936 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.04□□□□□ -1.92
TPM4P67936 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TPM4P67936 RNU4-23P-201ENST00000362839 140 ntBASIC3.04□□□□□ -1.92
TPM4P67936 MIR142-201ENST00000384835 87 ntBASIC3.04□□□□□ -1.92
TPM4P67936 MIR7-1-201ENST00000384871 110 ntBASIC3.04□□□□□ -1.92
TPM4P67936 VTA1P1-201ENST00000414044 866 ntBASIC3.04□□□□□ -1.92
TPM4P67936 MTCO3P12-201ENST00000416718 547 ntBASIC3.04□□□□□ -1.92
TPM4P67936 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.04□□□□□ -1.92
TPM4P67936 RPL21P32-201ENST00000419877 477 ntBASIC3.04□□□□□ -1.92
TPM4P67936 AC073508.1-201ENST00000428866 656 ntBASIC3.04□□□□□ -1.92
TPM4P67936 AL050321.1-201ENST00000432363 400 ntBASIC3.04□□□□□ -1.92
TPM4P67936 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TPM4P67936 AC127537.2-201ENST00000439258 465 ntBASIC3.04□□□□□ -1.92
TPM4P67936 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TPM4P67936 ZNF736P6Y-201ENST00000447526 1213 ntBASIC3.04□□□□□ -1.92
TPM4P67936 SRIP1-201ENST00000489235 288 ntBASIC3.04□□□□□ -1.92
TPM4P67936 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.04□□□□□ -1.92
TPM4P67936 SNORA31.13-201ENST00000516624 135 ntBASIC3.04□□□□□ -1.92
TPM4P67936 AC025881.1-201ENST00000518851 512 ntBASIC3.04□□□□□ -1.92
TPM4P67936 AC090136.1-201ENST00000520009 240 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms