Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH11P55287 Y_RNA.18-201ENST00000362461 102 ntBASIC3.58□□□□□ -1.84
CDH11P55287 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDH11P55287 SNORA70E-201ENST00000384492 135 ntBASIC3.58□□□□□ -1.84
CDH11P55287 Y_RNA.560-201ENST00000384689 102 ntBASIC3.58□□□□□ -1.84
CDH11P55287 RNU6-253P-201ENST00000384730 105 ntBASIC3.58□□□□□ -1.84
CDH11P55287 RNU6-952P-201ENST00000391164 108 ntBASIC3.58□□□□□ -1.84
CDH11P55287 AL021407.1-201ENST00000404531 386 ntBASIC3.58□□□□□ -1.84
CDH11P55287 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH11P55287 RNU6-920P-201ENST00000410926 92 ntBASIC3.58□□□□□ -1.84
CDH11P55287 RPL7AP73-201ENST00000413490 353 ntBASIC3.58□□□□□ -1.84
CDH11P55287 TPMTP2-201ENST00000414372 726 ntBASIC3.58□□□□□ -1.84
CDH11P55287 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH11P55287 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH11P55287 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH11P55287 Z99497.1-201ENST00000421282 135 ntBASIC3.58□□□□□ -1.84
CDH11P55287 AL035410.1-201ENST00000427409 427 ntBASIC3.58□□□□□ -1.84
CDH11P55287 UBE2FP3-201ENST00000436366 524 ntBASIC3.58□□□□□ -1.84
CDH11P55287 HMGB1P37-201ENST00000439613 609 ntBASIC3.58□□□□□ -1.84
CDH11P55287 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.58□□□□□ -1.84
CDH11P55287 CDC27P1-201ENST00000445384 715 ntBASIC3.58□□□□□ -1.84
CDH11P55287 AL359073.1-201ENST00000448036 403 ntBASIC3.58□□□□□ -1.84
CDH11P55287 ARPC3P5-201ENST00000448802 534 ntBASIC3.58□□□□□ -1.84
CDH11P55287 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH11P55287 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
CDH11P55287 ANP32BP2-201ENST00000454525 545 ntBASIC3.58□□□□□ -1.84
CDH11P55287 SNRPGP5-201ENST00000456003 220 ntBASIC3.58□□□□□ -1.84
CDH11P55287 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH11P55287 RPL31P50-201ENST00000471002 296 ntBASIC3.58□□□□□ -1.84
CDH11P55287 PPIAP15-201ENST00000479662 484 ntBASIC3.58□□□□□ -1.84
CDH11P55287 VN1R105P-201ENST00000486595 910 ntBASIC3.58□□□□□ -1.84
CDH11P55287 AC109486.1-201ENST00000486833 374 ntBASIC3.58□□□□□ -1.84
CDH11P55287 AC110792.1-201ENST00000491826 472 ntBASIC3.58□□□□□ -1.84
CDH11P55287 RPL7P24-201ENST00000493052 752 ntBASIC3.58□□□□□ -1.84
CDH11P55287 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.58□□□□□ -1.84
CDH11P55287 MTCO3P44-201ENST00000510977 541 ntBASIC3.58□□□□□ -1.84
CDH11P55287 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH11P55287 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH11P55287 MTCYBP43-201ENST00000513621 740 ntBASIC3.58□□□□□ -1.84
CDH11P55287 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.58□□□□□ -1.84
CDH11P55287 MTND4LP31-201ENST00000514859 294 ntBASIC3.58□□□□□ -1.84
CDH11P55287 IGKV2D-36-201ENST00000518643 226 ntBASIC3.58□□□□□ -1.84
CDH11P55287 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.58□□□□□ -1.84
CDH11P55287 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC3.58□□□□□ -1.84
CDH11P55287 AC239860.2-201ENST00000525886 270 ntBASIC3.58□□□□□ -1.84
CDH11P55287 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH11P55287 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.58□□□□□ -1.84
CDH11P55287 AC141257.3-201ENST00000572906 215 ntBASIC3.58□□□□□ -1.84
CDH11P55287 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.58□□□□□ -1.84
CDH11P55287 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.58□□□□□ -1.84
CDH11P55287 BNIP3P11-201ENST00000603878 563 ntBASIC3.58□□□□□ -1.84
CDH11P55287 AC105129.3-201ENST00000605455 485 ntBASIC3.58□□□□□ -1.84
CDH11P55287 AC106028.5-201ENST00000610332 395 ntBASIC3.58□□□□□ -1.84
CDH11P55287 MIR6875-201ENST00000617506 72 ntBASIC3.58□□□□□ -1.84
CDH11P55287 MIR4496-201ENST00000635896 61 ntBASIC3.58□□□□□ -1.84
CDH11P55287 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
CDH11P55287 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.58□□□□□ -1.84
CDH11P55287 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.58□□□□□ -1.84
CDH11P55287 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDH11P55287 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDH11P55287 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDH11P55287 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
CDH11P55287 RN7SKP280-201ENST00000364196 304 ntBASIC3.57□□□□□ -1.84
CDH11P55287 RNU6-660P-201ENST00000364566 109 ntBASIC3.57□□□□□ -1.84
CDH11P55287 RNU6-343P-201ENST00000364709 104 ntBASIC3.57□□□□□ -1.84
CDH11P55287 SNORD116-9-201ENST00000384000 95 ntBASIC3.57□□□□□ -1.84
CDH11P55287 SNORD116-3-201ENST00000384287 95 ntBASIC3.57□□□□□ -1.84
CDH11P55287 SNORD116-7-201ENST00000384404 95 ntBASIC3.57□□□□□ -1.84
CDH11P55287 SNORD116-5-201ENST00000384462 95 ntBASIC3.57□□□□□ -1.84
CDH11P55287 PABPC1P7-201ENST00000413177 1513 ntBASIC3.57□□□□□ -1.84
CDH11P55287 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH11P55287 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH11P55287 AL159169.1-201ENST00000421119 127 ntBASIC3.57□□□□□ -1.84
CDH11P55287 OR5BE1P-201ENST00000425977 939 ntBASIC3.57□□□□□ -1.84
CDH11P55287 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
CDH11P55287 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH11P55287 GDI2P1-201ENST00000429312 1336 ntBASIC3.57□□□□□ -1.84
CDH11P55287 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH11P55287 AL513185.3-201ENST00000433335 1300 ntBASIC3.57□□□□□ -1.84
CDH11P55287 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3.57□□□□□ -1.84
CDH11P55287 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.57□□□□□ -1.84
CDH11P55287 RPL23AP74-201ENST00000437246 471 ntBASIC3.57□□□□□ -1.84
CDH11P55287 AL117351.1-201ENST00000438864 766 ntBASIC3.57□□□□□ -1.84
CDH11P55287 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH11P55287 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.57□□□□□ -1.84
CDH11P55287 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH11P55287 MTCO3P16-201ENST00000454456 754 ntBASIC3.57□□□□□ -1.84
CDH11P55287 DNAJC19P1-201ENST00000455312 319 ntBASIC3.57□□□□□ -1.84
CDH11P55287 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.57□□□□□ -1.84
CDH11P55287 RPL30P9-201ENST00000465586 330 ntBASIC3.57□□□□□ -1.84
CDH11P55287 AC072039.1-201ENST00000477611 581 ntBASIC3.57□□□□□ -1.84
CDH11P55287 AC093767.1-201ENST00000504523 156 ntBASIC3.57□□□□□ -1.84
CDH11P55287 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.57□□□□□ -1.84
CDH11P55287 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH11P55287 FTH1P9-201ENST00000513251 355 ntBASIC3.57□□□□□ -1.84
CDH11P55287 RNU6-150P-201ENST00000516237 95 ntBASIC3.57□□□□□ -1.84
CDH11P55287 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.57□□□□□ -1.84
CDH11P55287 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC3.57□□□□□ -1.84
CDH11P55287 MED28P5-201ENST00000528254 438 ntBASIC3.57□□□□□ -1.84
CDH11P55287 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms