Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AL672296.1-201ENST00000427780 2158 ntBASIC3.64□□□□□ -1.83
VCPP55072 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
VCPP55072 MIR30E-201ENST00000362104 92 ntBASIC3.64□□□□□ -1.83
VCPP55072 AP002088.1-201ENST00000382740 395 ntBASIC3.64□□□□□ -1.83
VCPP55072 MIR620-201ENST00000385232 95 ntBASIC3.64□□□□□ -1.83
VCPP55072 MCTS2P-201ENST00000394552 546 ntBASIC3.64□□□□□ -1.83
VCPP55072 RPL23AP47-201ENST00000408017 460 ntBASIC3.64□□□□□ -1.83
VCPP55072 RNA5SP80-201ENST00000410475 111 ntBASIC3.64□□□□□ -1.83
VCPP55072 RNU6-55P-201ENST00000411092 107 ntBASIC3.64□□□□□ -1.83
VCPP55072 RNU6-954P-201ENST00000411355 107 ntBASIC3.64□□□□□ -1.83
VCPP55072 OOSP1P1-201ENST00000423265 274 ntBASIC3.64□□□□□ -1.83
VCPP55072 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
VCPP55072 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC3.64□□□□□ -1.83
VCPP55072 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC3.64□□□□□ -1.83
VCPP55072 HSFY7P-201ENST00000432672 318 ntBASIC3.64□□□□□ -1.83
VCPP55072 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC3.64□□□□□ -1.83
VCPP55072 AC234064.1-201ENST00000436312 247 ntBASIC3.64□□□□□ -1.83
VCPP55072 HSFY8P-201ENST00000437934 318 ntBASIC3.64□□□□□ -1.83
VCPP55072 TXNP1-201ENST00000441872 371 ntBASIC3.64□□□□□ -1.83
VCPP55072 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.64□□□□□ -1.83
VCPP55072 Z75741.1-201ENST00000446793 314 ntBASIC3.64□□□□□ -1.83
VCPP55072 NANOGNBP1-201ENST00000448444 480 ntBASIC3.64□□□□□ -1.83
VCPP55072 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.64□□□□□ -1.83
VCPP55072 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.64□□□□□ -1.83
VCPP55072 HSFY5P-201ENST00000453726 309 ntBASIC3.64□□□□□ -1.83
VCPP55072 AC010468.1-201ENST00000461022 817 ntBASIC3.64□□□□□ -1.83
VCPP55072 AC023598.1-201ENST00000472521 361 ntBASIC3.64□□□□□ -1.83
VCPP55072 SUMO2P5-201ENST00000506790 245 ntBASIC3.64□□□□□ -1.83
VCPP55072 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.64□□□□□ -1.83
VCPP55072 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.64□□□□□ -1.83
VCPP55072 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.64□□□□□ -1.83
VCPP55072 IGKV2D-36-201ENST00000518643 226 ntBASIC3.64□□□□□ -1.83
VCPP55072 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.64□□□□□ -1.83
VCPP55072 AP004371.1-201ENST00000525240 214 ntBASIC3.64□□□□□ -1.83
VCPP55072 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.64□□□□□ -1.83
VCPP55072 AC011602.1-201ENST00000546484 331 ntBASIC3.64□□□□□ -1.83
VCPP55072 AC004217.3-201ENST00000551552 878 ntBASIC3.64□□□□□ -1.83
VCPP55072 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.64□□□□□ -1.83
VCPP55072 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.64□□□□□ -1.83
VCPP55072 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC3.64□□□□□ -1.83
VCPP55072 AC107954.1-201ENST00000565906 727 ntBASIC3.64□□□□□ -1.83
VCPP55072 MIR5004-201ENST00000579078 107 ntBASIC3.64□□□□□ -1.83
VCPP55072 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC3.64□□□□□ -1.83
VCPP55072 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.64□□□□□ -1.83
VCPP55072 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
VCPP55072 AC022306.3-201ENST00000619930 550 ntBASIC3.64□□□□□ -1.83
VCPP55072 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC3.64□□□□□ -1.83
VCPP55072 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.64□□□□□ -1.83
VCPP55072 AL356118.1-201ENST00000635272 1078 ntBASIC3.64□□□□□ -1.83
VCPP55072 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.64□□□□□ -1.83
VCPP55072 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.64□□□□□ -1.83
VCPP55072 ZNF33BP1-201ENST00000452497 1834 ntBASIC3.64□□□□□ -1.83
VCPP55072 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.64□□□□□ -1.83
VCPP55072 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
VCPP55072 AP001350.1-201ENST00000601906 1524 ntBASIC3.64□□□□□ -1.83
VCPP55072 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VCPP55072 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VCPP55072 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VCPP55072 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VCPP55072 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VCPP55072 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VCPP55072 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VCPP55072 RNU6-7-201ENST00000364784 107 ntBASIC3.63□□□□□ -1.83
VCPP55072 RNU6-8-201ENST00000365467 107 ntBASIC3.63□□□□□ -1.83
VCPP55072 RNU6-629P-201ENST00000384061 103 ntBASIC3.63□□□□□ -1.83
VCPP55072 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
VCPP55072 SNORA48.8-201ENST00000391324 134 ntBASIC3.63□□□□□ -1.83
VCPP55072 AL121972.1-201ENST00000402023 252 ntBASIC3.63□□□□□ -1.83
VCPP55072 RPL7P27-201ENST00000403775 720 ntBASIC3.63□□□□□ -1.83
VCPP55072 RNU2-71P-201ENST00000411395 189 ntBASIC3.63□□□□□ -1.83
VCPP55072 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.63□□□□□ -1.83
VCPP55072 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.63□□□□□ -1.83
VCPP55072 ZNF736P7Y-201ENST00000425158 820 ntBASIC3.63□□□□□ -1.83
VCPP55072 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC3.63□□□□□ -1.83
VCPP55072 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.63□□□□□ -1.83
VCPP55072 FCF1P6-201ENST00000456841 595 ntBASIC3.63□□□□□ -1.83
VCPP55072 NAP1L1P3-201ENST00000462291 880 ntBASIC3.63□□□□□ -1.83
VCPP55072 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.63□□□□□ -1.83
VCPP55072 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.63□□□□□ -1.83
VCPP55072 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC3.63□□□□□ -1.83
VCPP55072 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
VCPP55072 AC091860.1-201ENST00000505723 432 ntBASIC3.63□□□□□ -1.83
VCPP55072 RNU6-202P-201ENST00000515998 96 ntBASIC3.63□□□□□ -1.83
VCPP55072 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC3.63□□□□□ -1.83
VCPP55072 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.63□□□□□ -1.83
VCPP55072 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.63□□□□□ -1.83
VCPP55072 BPTFP1-201ENST00000579209 492 ntBASIC3.63□□□□□ -1.83
VCPP55072 AL139022.2-201ENST00000606934 443 ntBASIC3.63□□□□□ -1.83
VCPP55072 AP004247.3-201ENST00000608682 624 ntBASIC3.63□□□□□ -1.83
VCPP55072 VN1R74P-201ENST00000613259 503 ntBASIC3.63□□□□□ -1.83
VCPP55072 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
VCPP55072 AC009269.6-201ENST00000621778 588 ntBASIC3.63□□□□□ -1.83
VCPP55072 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC3.63□□□□□ -1.83
VCPP55072 AC004808.1-201ENST00000627671 721 ntBASIC3.63□□□□□ -1.83
VCPP55072 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
VCPP55072 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.63□□□□□ -1.83
VCPP55072 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
VCPP55072 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
VCPP55072 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.63□□□□□ -1.83
VCPP55072 MFSD8-233ENST00000641482 4860 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms