Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AC006960.1-201ENST00000419980 153 ntBASIC3.74□□□□□ -1.81
LHX1P48742 AL159987.2-201ENST00000432754 307 ntBASIC3.74□□□□□ -1.81
LHX1P48742 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
LHX1P48742 CYCSP43-201ENST00000438233 310 ntBASIC3.74□□□□□ -1.81
LHX1P48742 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.74□□□□□ -1.81
LHX1P48742 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.74□□□□□ -1.81
LHX1P48742 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC3.74□□□□□ -1.81
LHX1P48742 PRDX3P3-201ENST00000447765 522 ntBASIC3.74□□□□□ -1.81
LHX1P48742 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.74□□□□□ -1.81
LHX1P48742 RPL18AP17-201ENST00000455326 198 ntBASIC3.74□□□□□ -1.81
LHX1P48742 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.74□□□□□ -1.81
LHX1P48742 RPL7P18-201ENST00000478965 734 ntBASIC3.74□□□□□ -1.81
LHX1P48742 RPL7P38-201ENST00000488396 739 ntBASIC3.74□□□□□ -1.81
LHX1P48742 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.74□□□□□ -1.81
LHX1P48742 MTCYBP17-201ENST00000503579 789 ntBASIC3.74□□□□□ -1.81
LHX1P48742 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.74□□□□□ -1.81
LHX1P48742 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LHX1P48742 AC026412.2-201ENST00000512270 1075 ntBASIC3.74□□□□□ -1.81
LHX1P48742 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.74□□□□□ -1.81
LHX1P48742 RNU6-583P-201ENST00000516012 92 ntBASIC3.74□□□□□ -1.81
LHX1P48742 RNY4P37-201ENST00000516225 96 ntBASIC3.74□□□□□ -1.81
LHX1P48742 RNU5A-4P-201ENST00000516588 111 ntBASIC3.74□□□□□ -1.81
LHX1P48742 IGKV2D-23-201ENST00000518179 286 ntBASIC3.74□□□□□ -1.81
LHX1P48742 NARSP2-201ENST00000518524 679 ntBASIC3.74□□□□□ -1.81
LHX1P48742 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.74□□□□□ -1.81
LHX1P48742 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.74□□□□□ -1.81
LHX1P48742 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.74□□□□□ -1.81
LHX1P48742 NRG1-IT1-203ENST00000523743 292 ntTSL 3 BASIC3.74□□□□□ -1.81
LHX1P48742 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.74□□□□□ -1.81
LHX1P48742 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LHX1P48742 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.74□□□□□ -1.81
LHX1P48742 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.74□□□□□ -1.81
LHX1P48742 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.74□□□□□ -1.81
LHX1P48742 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
LHX1P48742 AL512347.1-201ENST00000566420 503 ntBASIC3.74□□□□□ -1.81
LHX1P48742 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC3.74□□□□□ -1.81
LHX1P48742 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.74□□□□□ -1.81
LHX1P48742 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC3.74□□□□□ -1.81
LHX1P48742 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.74□□□□□ -1.81
LHX1P48742 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.74□□□□□ -1.81
LHX1P48742 VN1R79P-201ENST00000593540 513 ntBASIC3.74□□□□□ -1.81
LHX1P48742 AL355812.1-201ENST00000603215 216 ntBASIC3.74□□□□□ -1.81
LHX1P48742 AL158042.1-201ENST00000605338 460 ntBASIC3.74□□□□□ -1.81
LHX1P48742 HMGN2P28-201ENST00000606102 262 ntBASIC3.74□□□□□ -1.81
LHX1P48742 TUSC7.1-201ENST00000610969 165 ntBASIC3.74□□□□□ -1.81
LHX1P48742 AC087683.2-201ENST00000611384 326 ntBASIC3.74□□□□□ -1.81
LHX1P48742 AC243773.3-201ENST00000613270 256 ntBASIC3.74□□□□□ -1.81
LHX1P48742 AC079395.3-201ENST00000615161 484 ntBASIC3.74□□□□□ -1.81
LHX1P48742 AP000484.1-201ENST00000620067 1252 ntBASIC3.74□□□□□ -1.81
LHX1P48742 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.74□□□□□ -1.81
LHX1P48742 U6.105-201ENST00000637379 88 ntBASIC3.74□□□□□ -1.81
LHX1P48742 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.74□□□□□ -1.81
LHX1P48742 OR6C71P-202ENST00000641886 1107 ntBASIC3.74□□□□□ -1.81
LHX1P48742 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
LHX1P48742 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
LHX1P48742 MTCO1P23-201ENST00000415223 1526 ntBASIC3.74□□□□□ -1.81
LHX1P48742 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.73□□□□□ -1.81
LHX1P48742 FAM35DP-201ENST00000323387 2712 ntBASIC3.73□□□□□ -1.81
LHX1P48742 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LHX1P48742 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LHX1P48742 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LHX1P48742 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
LHX1P48742 SNORA63.1-201ENST00000362493 131 ntBASIC3.73□□□□□ -1.81
LHX1P48742 RNA5SP322-201ENST00000363617 119 ntBASIC3.73□□□□□ -1.81
LHX1P48742 RNU6-263P-201ENST00000363811 107 ntBASIC3.73□□□□□ -1.81
LHX1P48742 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
LHX1P48742 RNA5SP56-201ENST00000410277 118 ntBASIC3.73□□□□□ -1.81
LHX1P48742 RN7SKP111-201ENST00000410349 271 ntBASIC3.73□□□□□ -1.81
LHX1P48742 MTCO2P21-201ENST00000419780 677 ntBASIC3.73□□□□□ -1.81
LHX1P48742 FNDC3CP-201ENST00000420795 1155 ntBASIC3.73□□□□□ -1.81
LHX1P48742 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.73□□□□□ -1.81
LHX1P48742 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.73□□□□□ -1.81
LHX1P48742 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.73□□□□□ -1.81
LHX1P48742 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.73□□□□□ -1.81
LHX1P48742 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.73□□□□□ -1.81
LHX1P48742 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.73□□□□□ -1.81
LHX1P48742 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.73□□□□□ -1.81
LHX1P48742 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.73□□□□□ -1.81
LHX1P48742 RPS15AP17-201ENST00000470598 390 ntBASIC3.73□□□□□ -1.81
LHX1P48742 AP000926.1-201ENST00000479573 241 ntBASIC3.73□□□□□ -1.81
LHX1P48742 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.73□□□□□ -1.81
LHX1P48742 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.73□□□□□ -1.81
LHX1P48742 AC026784.1-201ENST00000507986 352 ntBASIC3.73□□□□□ -1.81
LHX1P48742 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.73□□□□□ -1.81
LHX1P48742 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.73□□□□□ -1.81
LHX1P48742 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.73□□□□□ -1.81
LHX1P48742 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.73□□□□□ -1.81
LHX1P48742 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC3.73□□□□□ -1.81
LHX1P48742 AC087465.1-201ENST00000560574 245 ntBASIC3.73□□□□□ -1.81
LHX1P48742 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.73□□□□□ -1.81
LHX1P48742 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.73□□□□□ -1.81
LHX1P48742 AL669831.4-202ENST00000590817 238 ntBASIC3.73□□□□□ -1.81
LHX1P48742 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.73□□□□□ -1.81
LHX1P48742 IGHV3-29-201ENST00000604817 344 ntBASIC3.73□□□□□ -1.81
LHX1P48742 AC069200.1-201ENST00000609511 323 ntBASIC3.73□□□□□ -1.81
LHX1P48742 AL355365.1-201ENST00000616480 294 ntBASIC3.73□□□□□ -1.81
LHX1P48742 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.73□□□□□ -1.81
LHX1P48742 AC004777.1-201ENST00000624317 287 ntBASIC3.73□□□□□ -1.81
LHX1P48742 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.73□□□□□ -1.81
LHX1P48742 AC244205.2-202ENST00000635781 342 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms