Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 snoU13.24-201ENST00000458998 104 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 RPL30P9-201ENST00000465586 330 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 AC093267.1-201ENST00000489176 961 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 AC023424.2-201ENST00000493479 777 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 AC106872.2-201ENST00000494303 480 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 AC093278.1-201ENST00000494700 600 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.38□□□□□ -1.87
NKX2-1P43699 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.38□□□□□ -1.87
NKX2-1P43699 POU5F1P7-201ENST00000508759 541 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 RNA5SP309-201ENST00000516670 106 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.38□□□□□ -1.87
NKX2-1P43699 OR5AP1P-201ENST00000529730 940 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 AP002963.1-201ENST00000530590 184 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 AC109635.4-202ENST00000531666 412 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 PSMB7P1-201ENST00000556349 514 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 AC091489.2-201ENST00000566263 604 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.38□□□□□ -1.87
NKX2-1P43699 MIR4480-201ENST00000582492 71 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.38□□□□□ -1.87
NKX2-1P43699 AC068790.2-201ENST00000602601 557 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 AC115286.1-201ENST00000604298 434 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 AC025594.3-201ENST00000613068 790 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.38□□□□□ -1.87
NKX2-1P43699 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.38□□□□□ -1.87
NKX2-1P43699 AC018755.4-201ENST00000619715 454 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 AP005019.3-201ENST00000620418 560 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 AC091953.3-201ENST00000623220 236 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 AC112200.1-201ENST00000625015 234 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.38□□□□□ -1.87
NKX2-1P43699 AC008013.2-202ENST00000637965 364 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
NKX2-1P43699 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.38□□□□□ -1.87
NKX2-1P43699 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.38□□□□□ -1.87
NKX2-1P43699 AP001350.1-201ENST00000601906 1524 ntBASIC3.38□□□□□ -1.87
NKX2-1P43699 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.38□□□□□ -1.87
NKX2-1P43699 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
NKX2-1P43699 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
NKX2-1P43699 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
NKX2-1P43699 RNU6-629P-201ENST00000384061 103 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
NKX2-1P43699 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
NKX2-1P43699 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NKX2-1P43699 SNORA11F-201ENST00000408237 128 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 MIR320C1-201ENST00000408566 88 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 RN7SKP106-201ENST00000410832 272 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC3.37□□□□□ -1.87
NKX2-1P43699 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.37□□□□□ -1.87
NKX2-1P43699 FAR2P2-201ENST00000413041 594 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.37□□□□□ -1.87
NKX2-1P43699 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.37□□□□□ -1.87
NKX2-1P43699 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.37□□□□□ -1.87
NKX2-1P43699 CHIAP3-201ENST00000423668 1133 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.37□□□□□ -1.87
NKX2-1P43699 LARP1BP3-201ENST00000437229 869 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 AL512326.1-201ENST00000443050 721 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 AL360221.1-201ENST00000445989 335 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 MTCO2P7-201ENST00000446518 666 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 OR6C5P-201ENST00000452388 923 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 KATNBL1P6-201ENST00000453433 915 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 MTND1P9-201ENST00000453775 944 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 ARPC3P2-201ENST00000457786 533 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 RPL35AP28-201ENST00000459730 331 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.37□□□□□ -1.87
NKX2-1P43699 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.37□□□□□ -1.87
NKX2-1P43699 AC106872.3-201ENST00000495104 446 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NKX2-1P43699 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.37□□□□□ -1.87
NKX2-1P43699 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.37□□□□□ -1.87
NKX2-1P43699 MTND5P13-201ENST00000513046 1079 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 MTCYBP43-201ENST00000513621 740 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.37□□□□□ -1.87
NKX2-1P43699 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC3.37□□□□□ -1.87
NKX2-1P43699 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.37□□□□□ -1.87
NKX2-1P43699 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.37□□□□□ -1.87
NKX2-1P43699 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.37□□□□□ -1.87
NKX2-1P43699 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.37□□□□□ -1.87
NKX2-1P43699 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
NKX2-1P43699 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.37□□□□□ -1.87
NKX2-1P43699 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.37□□□□□ -1.87
NKX2-1P43699 AC010547.3-201ENST00000569271 440 ntTSL 2 BASIC3.37□□□□□ -1.87
NKX2-1P43699 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC3.37□□□□□ -1.87
NKX2-1P43699 AC069061.3-201ENST00000582254 823 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.37□□□□□ -1.87
NKX2-1P43699 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.37□□□□□ -1.87
NKX2-1P43699 AL049634.3-201ENST00000604968 457 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 AC087752.4-201ENST00000605911 462 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 AL590282.1-201ENST00000610379 1136 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 AL161616.1-201ENST00000611867 286 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 AC073114.1-201ENST00000612027 490 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 AC092140.2-201ENST00000618027 521 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.37□□□□□ -1.87
NKX2-1P43699 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.37□□□□□ -1.87
NKX2-1P43699 AL356596.1-201ENST00000624230 379 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
NKX2-1P43699 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.37□□□□□ -1.87
NKX2-1P43699 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
NKX2-1P43699 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
NKX2-1P43699 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
NKX2-1P43699 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NKX2-1P43699 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms