Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
LTBRP36941 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LTBRP36941 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
LTBRP36941 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
LTBRP36941 SMG1P6-201ENST00000532337 2930 ntBASIC4.98□□□□□ -1.61
LTBRP36941 AC006020.1-201ENST00000420179 1854 ntBASIC4.98□□□□□ -1.61
LTBRP36941 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
LTBRP36941 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
LTBRP36941 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.97□□□□□ -1.61
LTBRP36941 SALL4P2-201ENST00000423288 2910 ntBASIC4.97□□□□□ -1.61
LTBRP36941 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
LTBRP36941 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LTBRP36941 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LTBRP36941 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.97□□□□□ -1.61
LTBRP36941 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
LTBRP36941 Y_RNA.255-201ENST00000364581 97 ntBASIC4.97□□□□□ -1.61
LTBRP36941 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
LTBRP36941 RNU6-39P-201ENST00000384344 107 ntBASIC4.97□□□□□ -1.61
LTBRP36941 RNU1-82P-201ENST00000390851 165 ntBASIC4.97□□□□□ -1.61
LTBRP36941 AL356432.1-201ENST00000405809 419 ntBASIC4.97□□□□□ -1.61
LTBRP36941 RNU2-62P-201ENST00000410868 191 ntBASIC4.97□□□□□ -1.61
LTBRP36941 RPL7AP25-201ENST00000423357 805 ntBASIC4.97□□□□□ -1.61
LTBRP36941 AL353597.2-202ENST00000434901 373 ntBASIC4.97□□□□□ -1.61
LTBRP36941 DDX3P2-201ENST00000446138 111 ntBASIC4.97□□□□□ -1.61
LTBRP36941 BX276092.4-201ENST00000452056 248 ntBASIC4.97□□□□□ -1.61
LTBRP36941 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.97□□□□□ -1.61
LTBRP36941 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.97□□□□□ -1.61
LTBRP36941 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.97□□□□□ -1.61
LTBRP36941 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC4.97□□□□□ -1.61
LTBRP36941 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC4.97□□□□□ -1.61
LTBRP36941 FGF7P4-201ENST00000509595 295 ntBASIC4.97□□□□□ -1.61
LTBRP36941 MRPL49P2-201ENST00000521066 465 ntBASIC4.97□□□□□ -1.61
LTBRP36941 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC4.97□□□□□ -1.61
LTBRP36941 AC022690.1-201ENST00000526681 550 ntBASIC4.97□□□□□ -1.61
LTBRP36941 RPL21P12-201ENST00000559810 515 ntBASIC4.97□□□□□ -1.61
LTBRP36941 AC037471.2-201ENST00000564941 598 ntBASIC4.97□□□□□ -1.61
LTBRP36941 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.97□□□□□ -1.61
LTBRP36941 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.97□□□□□ -1.61
LTBRP36941 AP001429.1-201ENST00000602568 530 ntBASIC4.97□□□□□ -1.61
LTBRP36941 AC105429.2-201ENST00000610567 517 ntBASIC4.97□□□□□ -1.61
LTBRP36941 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
LTBRP36941 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LTBRP36941 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
LTBRP36941 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
LTBRP36941 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
LTBRP36941 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
LTBRP36941 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LTBRP36941 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LTBRP36941 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
LTBRP36941 OR14L1P-202ENST00000641545 3009 ntBASIC4.97□□□□□ -1.61
LTBRP36941 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
LTBRP36941 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.96□□□□□ -1.61
LTBRP36941 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.96□□□□□ -1.61
LTBRP36941 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.96□□□□□ -1.61
LTBRP36941 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LTBRP36941 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
LTBRP36941 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LTBRP36941 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LTBRP36941 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LTBRP36941 RN7SKP145-201ENST00000363291 303 ntBASIC4.96□□□□□ -1.62
LTBRP36941 RNU6-996P-201ENST00000365438 107 ntBASIC4.96□□□□□ -1.62
LTBRP36941 RNU6-606P-201ENST00000384721 111 ntBASIC4.96□□□□□ -1.62
LTBRP36941 U3.29-201ENST00000391296 212 ntBASIC4.96□□□□□ -1.62
LTBRP36941 AL356057.2-201ENST00000403318 432 ntBASIC4.96□□□□□ -1.62
LTBRP36941 AL136116.1-201ENST00000403591 381 ntBASIC4.96□□□□□ -1.62
LTBRP36941 U3.32-201ENST00000408116 212 ntBASIC4.96□□□□□ -1.62
LTBRP36941 RN7SKP267-201ENST00000410381 285 ntBASIC4.96□□□□□ -1.62
LTBRP36941 AC006946.1-201ENST00000429106 328 ntBASIC4.96□□□□□ -1.62
LTBRP36941 EZH2P1-201ENST00000431167 291 ntBASIC4.96□□□□□ -1.62
LTBRP36941 OR4K11P-201ENST00000431829 904 ntBASIC4.96□□□□□ -1.62
LTBRP36941 RPL34P6-201ENST00000432390 345 ntBASIC4.96□□□□□ -1.62
LTBRP36941 RPS20P5-201ENST00000434808 360 ntBASIC4.96□□□□□ -1.62
LTBRP36941 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.96□□□□□ -1.62
LTBRP36941 RPL7AP61-201ENST00000443410 636 ntBASIC4.96□□□□□ -1.62
LTBRP36941 RPL21P89-201ENST00000444021 467 ntBASIC4.96□□□□□ -1.62
LTBRP36941 RPL7P12-201ENST00000446719 750 ntBASIC4.96□□□□□ -1.62
LTBRP36941 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC4.96□□□□□ -1.62
LTBRP36941 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.96□□□□□ -1.62
LTBRP36941 AC108059.3-201ENST00000456388 214 ntBASIC4.96□□□□□ -1.62
LTBRP36941 AC087385.1-201ENST00000475062 312 ntBASIC4.96□□□□□ -1.62
LTBRP36941 AL163973.1-201ENST00000484753 577 ntBASIC4.96□□□□□ -1.62
LTBRP36941 EIF4EP3-201ENST00000498782 656 ntBASIC4.96□□□□□ -1.62
LTBRP36941 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC4.96□□□□□ -1.62
LTBRP36941 HSPD1P15-201ENST00000505573 1122 ntBASIC4.96□□□□□ -1.62
LTBRP36941 AC015795.1-201ENST00000513669 327 ntBASIC4.96□□□□□ -1.62
LTBRP36941 MIR2116-201ENST00000517221 80 ntBASIC4.96□□□□□ -1.62
LTBRP36941 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.96□□□□□ -1.62
LTBRP36941 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.96□□□□□ -1.62
LTBRP36941 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.96□□□□□ -1.62
LTBRP36941 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.96□□□□□ -1.62
LTBRP36941 OR4K8P-201ENST00000578842 1048 ntBASIC4.96□□□□□ -1.62
LTBRP36941 MIR4716-201ENST00000579628 84 ntBASIC4.96□□□□□ -1.62
LTBRP36941 COX6CP3-201ENST00000580869 223 ntBASIC4.96□□□□□ -1.62
LTBRP36941 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.96□□□□□ -1.62
LTBRP36941 AC064836.2-201ENST00000609491 462 ntBASIC4.96□□□□□ -1.62
LTBRP36941 AC135507.2-201ENST00000612443 309 ntBASIC4.96□□□□□ -1.62
LTBRP36941 MIR6133-201ENST00000617057 108 ntBASIC4.96□□□□□ -1.62
LTBRP36941 BX005214.3-202ENST00000619809 325 ntBASIC4.96□□□□□ -1.62
LTBRP36941 AP005019.3-201ENST00000620418 560 ntBASIC4.96□□□□□ -1.62
LTBRP36941 AC005858.4-201ENST00000623191 700 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 129.3 ms