Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RFC4P35249 AL021368.2-201ENST00000606125 5352 ntBASIC3.67□□□□□ -1.82
RFC4P35249 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RFC4P35249 AP001350.1-201ENST00000601906 1524 ntBASIC3.67□□□□□ -1.82
RFC4P35249 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RFC4P35249 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
RFC4P35249 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RFC4P35249 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.67□□□□□ -1.82
RFC4P35249 AL049610.1-201ENST00000423374 372 ntBASIC3.67□□□□□ -1.82
RFC4P35249 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
RFC4P35249 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.67□□□□□ -1.82
RFC4P35249 BX679664.1-201ENST00000434429 253 ntBASIC3.67□□□□□ -1.82
RFC4P35249 RPS12P18-201ENST00000442381 270 ntBASIC3.67□□□□□ -1.82
RFC4P35249 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC3.67□□□□□ -1.82
RFC4P35249 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.67□□□□□ -1.82
RFC4P35249 MTND2P30-201ENST00000456663 382 ntBASIC3.67□□□□□ -1.82
RFC4P35249 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.67□□□□□ -1.82
RFC4P35249 MTCO2P32-201ENST00000514865 403 ntBASIC3.67□□□□□ -1.82
RFC4P35249 RNU6-1073P-201ENST00000517182 106 ntBASIC3.67□□□□□ -1.82
RFC4P35249 OR5AK3P-201ENST00000527486 1297 ntBASIC3.67□□□□□ -1.82
RFC4P35249 PDCL2P2-201ENST00000533651 189 ntBASIC3.67□□□□□ -1.82
RFC4P35249 AL442163.2-201ENST00000553912 710 ntBASIC3.67□□□□□ -1.82
RFC4P35249 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.67□□□□□ -1.82
RFC4P35249 AC106734.1-201ENST00000568646 663 ntBASIC3.67□□□□□ -1.82
RFC4P35249 AL365503.1-201ENST00000605247 905 ntBASIC3.67□□□□□ -1.82
RFC4P35249 AC087241.4-201ENST00000612441 480 ntBASIC3.67□□□□□ -1.82
RFC4P35249 AC092628.2-201ENST00000622492 339 ntBASIC3.67□□□□□ -1.82
RFC4P35249 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC3.67□□□□□ -1.82
RFC4P35249 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
RFC4P35249 AC021755.1-201ENST00000559747 1447 ntBASIC3.67□□□□□ -1.82
RFC4P35249 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.67□□□□□ -1.82
RFC4P35249 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RFC4P35249 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RFC4P35249 MTND4P34-201ENST00000572715 1371 ntBASIC3.66□□□□□ -1.82
RFC4P35249 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
RFC4P35249 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
RFC4P35249 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
RFC4P35249 RPL7P8-201ENST00000411964 730 ntBASIC3.66□□□□□ -1.82
RFC4P35249 ARL5AP4-201ENST00000430731 512 ntBASIC3.66□□□□□ -1.82
RFC4P35249 AL590103.1-201ENST00000434488 307 ntBASIC3.66□□□□□ -1.82
RFC4P35249 HMGN2P20-201ENST00000437531 273 ntBASIC3.66□□□□□ -1.82
RFC4P35249 ELOCP13-201ENST00000443934 329 ntBASIC3.66□□□□□ -1.82
RFC4P35249 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.66□□□□□ -1.82
RFC4P35249 NIPA2P5-201ENST00000452282 464 ntBASIC3.66□□□□□ -1.82
RFC4P35249 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.66□□□□□ -1.82
RFC4P35249 AC004801.2-202ENST00000463559 283 ntBASIC3.66□□□□□ -1.82
RFC4P35249 AC010401.1-201ENST00000463867 348 ntBASIC3.66□□□□□ -1.82
RFC4P35249 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.66□□□□□ -1.82
RFC4P35249 AC010468.3-201ENST00000508225 458 ntBASIC3.66□□□□□ -1.82
RFC4P35249 AC025768.1-201ENST00000510057 267 ntBASIC3.66□□□□□ -1.82
RFC4P35249 MTND2P31-201ENST00000512602 616 ntBASIC3.66□□□□□ -1.82
RFC4P35249 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.66□□□□□ -1.82
RFC4P35249 LY96-202ENST00000518893 430 ntTSL 3 BASIC3.66□□□□□ -1.82
RFC4P35249 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC3.66□□□□□ -1.82
RFC4P35249 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.66□□□□□ -1.82
RFC4P35249 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RFC4P35249 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.66□□□□□ -1.82
RFC4P35249 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.66□□□□□ -1.82
RFC4P35249 KATNBL1P5-201ENST00000605015 517 ntBASIC3.66□□□□□ -1.82
RFC4P35249 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
RFC4P35249 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC3.66□□□□□ -1.82
RFC4P35249 AC243829.7-201ENST00000633081 225 ntBASIC3.66□□□□□ -1.82
RFC4P35249 ZNF826P-207ENST00000622273 1910 ntBASIC3.66□□□□□ -1.82
RFC4P35249 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
RFC4P35249 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
RFC4P35249 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RFC4P35249 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
RFC4P35249 MIR34A-201ENST00000385130 110 ntBASIC3.65□□□□□ -1.83
RFC4P35249 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RFC4P35249 USP9YP19-201ENST00000412165 485 ntBASIC3.65□□□□□ -1.83
RFC4P35249 TATDN1P1-201ENST00000414123 891 ntBASIC3.65□□□□□ -1.83
RFC4P35249 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RFC4P35249 GLRXP1-201ENST00000423261 334 ntBASIC3.65□□□□□ -1.83
RFC4P35249 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RFC4P35249 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC3.65□□□□□ -1.83
RFC4P35249 HMGN1P18-201ENST00000457642 277 ntBASIC3.65□□□□□ -1.83
RFC4P35249 AC092754.2-201ENST00000463506 460 ntBASIC3.65□□□□□ -1.83
RFC4P35249 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.65□□□□□ -1.83
RFC4P35249 RN7SKP60-201ENST00000516985 239 ntBASIC3.65□□□□□ -1.83
RFC4P35249 SCARNA20.6-201ENST00000517251 106 ntBASIC3.65□□□□□ -1.83
RFC4P35249 AP001207.2-201ENST00000519490 539 ntBASIC3.65□□□□□ -1.83
RFC4P35249 AP001207.1-201ENST00000524051 481 ntBASIC3.65□□□□□ -1.83
RFC4P35249 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.65□□□□□ -1.83
RFC4P35249 AC079610.2-201ENST00000604818 690 ntBASIC3.65□□□□□ -1.83
RFC4P35249 AC011374.2-201ENST00000607135 526 ntBASIC3.65□□□□□ -1.83
RFC4P35249 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC3.65□□□□□ -1.83
RFC4P35249 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.65□□□□□ -1.83
RFC4P35249 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.65□□□□□ -1.83
RFC4P35249 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.65□□□□□ -1.83
RFC4P35249 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
RFC4P35249 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
RFC4P35249 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RFC4P35249 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.65□□□□□ -1.83
RFC4P35249 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
RFC4P35249 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
RFC4P35249 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
RFC4P35249 AC046144.1-201ENST00000478559 1853 ntBASIC3.64□□□□□ -1.83
RFC4P35249 MTND5P28-201ENST00000438005 1594 ntBASIC3.64□□□□□ -1.83
RFC4P35249 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RFC4P35249 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms